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2023

• Article
  J. van Dijk, G. Závodszky, A. L. Varbanescu, A. D. Pimentel, and A. G. Hoekstra. Building a Fine-Grained Analytical Performance Model for Complex Scientific Simulations. Lecture Notes in Computer Science 13826.
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• Article
  Y. Hao, G. Závodszky, C. Tersteeg, M. Barzegari, and A. G. Hoekstra. Image-based flow simulation of platelet aggregates under different shear rates. PLoS Computational Biology 19(7), e1010965.
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• Article
  C. J. Spieker, G. Závodszky, C. Mouriaux, P. H. Mangin, and A. G. Hoekstra. Initial platelet aggregation in the complex shear environment of a punctured vessel model. Physics of Fluids 35(7), 071904.
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2022

• Article
  B. Czaja, J. de Bouter, M. Heisler, G. Závodszky, S. Karst, M. Sarunic, D. Maberley, and A. Hoekstra. The effect of stiffened diabetic red blood cells on wall shear stress in a reconstructed 3D microaneurysm. Computer methods in biomechanics & biomedical engineering 25(15), pp. 1691-1709.
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• Article
  Alexandra A Yakusheva, Kirill R. Butov, Georgii A. Bykov, Gábor Závodszky, Anita Eckly, Fazly I Ataullakhanov, Christian Gachet, Mikhail A Panteleev, and Pierre H Mangin. Traumatic vessel injuries initiating hemostasis generate high shear conditions. Blood Advances .
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• Article
  Raymond M. Padmos, Nerea Arrarte Terreros, Tamás I. Józsa, Gábor Závodszky, Henk A. Marquering, Charles B. L. M. Majoie, Stephen J. Payne, and Alfons G. Hoekstra. Modelling collateral flow and thrombus permeability during acute ischaemic stroke. Journal of the Royal Society Interface 19(195), 20220649.
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• Article
  Quentin Kimmerlin, Sylvie Moog, Alexandra Yakusheva, Catherine Ziessel, Anita Eckly, Monique Freund, Gábor Závodszky, Yannick Knapp, Pierre Mangin, and François Lanza. Loss of α4A- and β1-tubulins leads to severe platelet spherocytosis and strongly impairs hemostasis in mice. Blood 140(21), pp. 2290-2299.
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2021

• Article
  B. J. M. van Rooij, G. Závodszky, A. G. Hoekstra, and D. N. Ku. Haemodynamic flow conditions at the initiation of high-shear platelet aggregation: a combined in vitro and cellular in silico study. Interface Focus 11(1), 20190126.
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• Article
  R. M. Padmos, N. Arrarte Terreros, T. I. Józsa, G. Závodszky, H. A. Marquering, C. B. L. M. Majoie, and A. G. Hoekstra. Modelling the leptomeningeal collateral circulation during acute ischaemic stroke. Medical Engineering & Physics 91, pp. 1-11.
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• Proceedings
  R. M. Padmos, T. I. Józsa, W. K. El-Bouri, G. Závodszky, S. J. Payne, and A. G. Hoekstra. Two-Way Coupling Between 1D Blood Flow and 3D Tissue Perfusion Models. In: Computational Science – ICCS 2021. ISBN 9783030779672. III, pp. 670-683.
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• Article
  S. V. Kovalchuk, V. V. Krzhizhanovskaya, M. Paszyński, G. Závodszky, M. H. Lees, J. Dongarra, and P. M. A. Sloot. 20 years of computational science: Selected papers from 2020 International Conference on Computational Science. Journal of Computational Science 53, 101395.
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• Article
  C. J. Spieker, G. Závodszky, C. Mouriaux, M. van der Kolk, C. Gachet, P. H. Mangin, and A. G. Hoekstra. The Effects of Micro-vessel Curvature Induced Elongational Flows on Platelet Adhesion. Annals of Biomedical Engineering 49(12), p. 3609–3620.
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2020

• Article
  B. Csippa, D. Gyürki, G. Závodszky, I. Szikora, and G. Paál. Hydrodynamic Resistance of Intracranial Flow-Diverter Stents. Cardiovascular Engineering and Technology 11(1), pp. 1-13.
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• Proceedings
  B. Czaja, G. Závodszky, and A. Hoekstra. A Heterogeneous Multi-scale Model for Blood Flow. In: Computational Science – ICCS 2020. ISBN 9783030504335. VI, pp. 403-409.
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• Article
  G. Závodszky, B. Csippa, G. Paál, and I. Szikora. A novel virtual flow diverter implantation method with realistic deployment mechanics and validated force response. International Journal for Numerical Methods in Biomedical Engineering 36(6), e3340.
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• Article
  B. Czaja, M. Gutierrez, G. Závodszky, D. de Kanter, A. Hoekstra, and O. Eniola-Adefeso. The influence of red blood cell deformability on hematocrit profiles and platelet margination. PLoS Computational Biology 16(3), e1007716.
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• Article
  K. de Vries, A. Nikishova, B. Czaja, G. Závodszky, and A. G. Hoekstra. Inverse Uncertainty Quantification of a cell model using a Gaussian Process metamodel. International Journal for Uncertainty Quantification 10(4), pp. 333-349.
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• Article
  B. J. M. van Rooij, G. Závodszky, A. G. Hoekstra, and D. N. Ku. Biorheology of occlusive thrombi formation under high shear: in vitro growth and shrinkage. Scientific Reports 10, 18604.
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• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030503710. I, pp. v-vi.
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• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030504267. V, pp. v-vi.
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• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030504205. III, pp. v-vi.
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• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030504366. VII, pp. v-vi.
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• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030504175. II, pp. v-vi.
  Citation Links
• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030504335. VI, pp. v-vi.
  Citation Links
• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030504236. IV, pp. v-vi.
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2019

• Article
  P. Berg, S. Voß, G. Janiga, S. Saalfeld, A. W. Bergersen, K. Valen-Sendstad, J. Bruening, L. Goubergrits, A. Spuler, T. L. Chiu, A. C. O. Tsang, G. Copelli, B. Csippa, G. Paál, G. Závodszky, F. J. Detmer, B. J. Chung, J. R. Cebral, S. Fujimura, H. Takao, C. Karmonik, S. Elias, N. M. Cancelliere, M. Najafi, D. A. Steinman, V. M. Pereira, S. Piskin, E. A. Finol, M. Pravdivtseva, P. Velvaluri, H. Rajabzadeh-Oghaz, N. Paliwal, H. Meng, S. Seshadhri, S. Venguru, M. Shojima, S. Sindeev, S. Frolov, Y. Qian, Y.-A. Wu, K. D. Carlson, D. F. Kallmes, D. Dragomir-Daescu, and O. Beuing. Multiple Aneurysms AnaTomy CHallenge 2018 (MATCH)—phase II: rupture risk assessment. International Journal of Computer Assisted Radiology and Surgery 14(10), p. 1795–1804.
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• Article
  G. Závodszky, B. van Rooij, B. Czaja, V. Azizi, D. de Kanter, and A. G. Hoekstra. Red blood cell and platelet diffusivity and margination in the presence of cross-stream gradients in blood flows. Physics of Fluids 31(3), 031903.
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• Proceedings
  V. Azizi Tarksalooyeh, G. Závodszky, and A. G. Hoekstra. Optimizing Parallel Performance of the Cell Based Blood Flow Simulation Software HemoCell. In: Computational Science – ICCS 2019. ISBN 9783030227449. III, pp. 537-547.
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• Article
  B. J. M. van Rooij, G. Závodszky, V. W. Azizi Tarksalooyeh, and A. G. Hoekstra. Identifying the start of a platelet aggregate by the shear rate and the cell-depleted layer. Journal of the Royal Society Interface 16(159), 20190148.
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2018

• Article
  S. Alowayyed, G. Závodszky, V. Azizi, and A. G. Hoekstra. Load balancing of parallel cell-based blood flow simulations. Journal of Computational Science 24, pp. 1-7.
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• Proceedings
  J. S. Y. Tan, G. Závodszky, and P. M. A. Sloot. Understanding Malaria Induced Red Blood Cell Deformation Using Data-Driven Lattice Boltzmann Simulations. In: Computational Science – ICCS 2018. ISBN 9783319936987. pp. 392-403.
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• Article
  B. Czaja, G. Závodszky, V. Azizi Tarksalooyeh, and A. G. Hoekstra. Cell-resolved blood flow simulations of saccular aneurysms: effects of pulsatility and aspect ratio. Journal of the Royal Society Interface 15(146), 20180485.
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• Article
  B. Csippa, G. Závodszky, G. Paál, and I. Szikora. A new hypothesis on the role of vessel topology in cerebral aneurysm initiation. Computers in Biology and Medicine 103, pp. 244-251.
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• Article
  V. W. Azizi Tarksalooyeh, G. Závodszky, B. J. M. van Rooij, and A. G. Hoekstra. Inflow and outflow boundary conditions for 2D suspension simulations with the immersed boundary lattice Boltzmann method. Computers & fluids 172, p. 312–317.
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2017

• Article
  G. Závodszky, B. van Rooij, V. Azizi, and A. Hoekstra. Cellular Level In-silico Modeling of Blood Rheology with An Improved Material Model for Red Blood Cells. Frontiers in Physiology 8, 563.
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• Article
  G. Závodszky, B. van Rooij, V. Azizi, S. Alowayyed, and A. Hoekstra. Hemocell: a high-performance microscopic cellular library. Procedia Computer Science 108, pp. 159-165.
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2016

• Article
  A. G. Hoekstra, S. Alowayyed, E. Lorenz, N. Melnikova, L. Mountrakis, B. van Rooij, A. Svitenkov, G. Závodszky, and P. Zun. Towards the virtual artery: a multiscale model for vascular physiology at the physics–chemistry–biology interface. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences 374(2080), 20160146.
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