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2022
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Article
M. W. J. van den Ende, S. Epskamp, M. H. Lees, H. L. J. van der Maas, R. W. Wiers, and P. M. A. Sloot.
A review of mathematical modeling of addiction regarding both (neuro-) psychological processes and the social contagion perspectives.
Addictive Behaviors
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Article
K. van der Zwet, A. I. Barros, T. M. van Engers, and P. M. A. Sloot.
Promises and pitfalls of computational modelling for insurgency conflicts.
The Journal of Defense Modeling and Simulation: Applications, Methodology, Technology
.
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Article
H. I. Korkmaz, F. B. Niessen, A. Pijpe, V. M. Sheraton, F. J. Vermolen, P. A. J. Krijnen, H. W. M. Niessen, P. M. A. Sloot, E. Middelkoop, S. Gibbs, and P. P. M. van Zuijlen.
Scar formation from the perspective of complexity science: a new look at the biological system as a whole.
Journal of Wound Care
pp. 178-184.
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Article
C. van Elteren, R. Quax, and P. Sloot.
Dynamic importance of network nodes is poorly predicted by static structural features.
Physica A : Statistical Mechanics and its Applications
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Article
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Article
K. van der Zwet, A. I. Barros, T. M. van Engers, and P. M. A. Sloot.
Emergence of protests during the COVID-19 pandemic: quantitative models to explore the contributions of societal conditions.
Humanities and Social Sciences Communications
.
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Article
Paul P. M. van Zuijlen, Halil Ibrahim Korkmaz Korkmaz, V. M. Sheraton, Tsjitske M. Haanstra, Anouk Pijpe, Annebeth de Vries, C. H. van der Vlies, Eelke Bosma, Evelien de Jong, Esther Middelkoop, F. J. Vermolen, and P. M. A. Sloot.
The Future of Burn Care From a Complexity Science Perspective.
Journal of Burn Care & Research
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Article
P. Rutten, M. H. Lees, S. Klous, H. Heesterbeek, and P. M. A. Sloot.
Modelling the dynamic relationship between spread of infection and observed crowd movement patterns at large scale events.
Scientific Reports
.
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Article
S. V. Kovalchuk, V. V. Krzhizhanovskaya, M. Paszyński, D. Kranzlmüller, J. Dongarra, and P. M. A. Sloot.
Computational science for a better future.
Journal of Computational Science
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Article
gabriele spin, P. M. A. Sloot, E. Mancini, Thomas Attema, mark abspoel, Jan de Gier, Serge Fehr, Thijs Veugen, Maran van Heesch, Daniel Worm, Andrea De Luca, and R. Cramer.
New Approach to Privacy-Preserving Clinical Decision Support Systems for HIV Treatment.
Journal of medical systems
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2021
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Article
P. Rutten, M. H. Lees, S. Klous, and P. M. A. Sloot.
Intermittent and persistent movement patterns of dance event visitors in large sporting venues.
Physica A : Statistical Mechanics and its Applications
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Article
C. E. S. Mattsson, F. W. Takes, E. M. Heemskerk, C. Diks, G. Buiten, A. Faber, and P. M. A. Sloot.
Functional Structure in Production Networks.
Frontiers in Big Data
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Article
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Article
P. Rutten, M. H. Lees, S. Klous, and P. M. A. Sloot.
State-space models reveal bursty movement behaviour of dance event visitors.
EPJ Data Science
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Article
A. Presbitero, V. R. Melnikov, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
A unifying model to estimate the effect of heat stress in the human innate immunity during physical activities.
Scientific Reports
.
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Article
J. van der Wal, C. D. van Borkulo, M. K. Deserno, J. J. F. Breedvelt, M. Lees, J. C. Lokman, D. Borsboom, D. Denys, R. J. van Holst, M. P. Smidt, K. Stronks, P. J. Lucassen, J. C. M. van Weert, P. M. A. Sloot, C. L. Bockting, and R. W. Wiers.
Advancing urban mental health research: from complexity science to actionable targets for intervention.
The Lancet. Psychiatry
8(11), pp. 991-1000.
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Article
V. Karbovskii, M. Lees, A. Presbitero, A. Kurilkin, D. Voloshin, I. Derevitskii, A. Karsakov, and P. M. A. Sloot.
Ensemble learning for large-scale crowd flow prediction.
Engineering Applications of Artificial Intelligence
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Article
G. Buiten, C. Diks, A. Faber, E. Heemskerk, C. Mattsson, F. Takes, and P. Sloot.
Netwerkanalyse biedt nieuwe inzichten voor clustergericht energiebeleid.
Economisch-Statistische Berichten
pp. 586-588.
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Article
P. Dutta, R. Quax, L. Crielaard, L. Badiali, and P. M. A. Sloot.
Inferring temporal dynamics from cross-sectional data using Langevin dynamics.
Royal Society Open Science
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2020
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Article
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Article
L. Crielaard, P. Dutta, R. Quax, M. Nicolaou, N. Merabet, K. Stronks, and P. M. A. Sloot.
Social norms and obesity prevalence: From cohort to system dynamics models.
Obesity Reviews
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Article
O. Har-Shemesh, R. Quax, J. S. Lansing, and P. M. A. Sloot.
Questionnaire data analysis using information geometry.
Scientific Reports
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Proceedings
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Article
C. H. Tan, H.-S. Oh, V. M. Sheraton, E. Mancini, S. C. J. Loo, S. Kjelleberg, P. M. A. Sloot, and S. A. Rice.
Convection and the Extracellular Matrix Dictate Inter- and Intra-Biofilm Quorum Sensing Communication in Environmental Systems.
Environmental Science and Technology
p. 6730–6740.
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Article
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Article
P. J. S. Cardoso, J. M. F. Rodrigues, J. Monteiro, R. Lam, V. V. Krzhizhanovskaya, M. H. Lees, J. Dongarra, and P. M. A. Sloot.
Computational Science in the Interconnected World: Selected papers from 2019 International Conference on Computational Science.
Journal of Computational Science
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Article
M. V. Sheraton, G. G. Y. Chiew, V. Melnikov, E. Y. Tan, K. Q. Luo, N. Verma, and P. M. A. Sloot.
Emergence of spatio-temporal variations in chemotherapeutic drug efficacy: in-vitro and in-Silico 3D tumour spheroid studies.
BMC Cancer
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Article
O. Severiukhina, S. Kesarev, K. Bochenina, A. Boukhanovsky, M. H. Lees, and P. M. A. Sloot.
Large-scale forecasting of information spreading.
Journal of Big Data
.
2019
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Article
P. Dutta, L. Ma, Y. Ali, P. M. A. Sloot, and J. Zheng.
Boolean network modeling of β-cell apoptosis and insulin resistance in type 2 diabetes mellitus.
BMC Systems Biology
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Article
Z. Huang, E. Lum, G. Jimenez, M. Semwal, P. Sloot, and J. Car.
Medication management support in diabetes: a systematic assessment of diabetes self-management apps.
BMC Medicine
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Article
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Article
M. G. M. Olde Rikkert, P. P. M. van Zuijlen, M. de Kleuver, A. van Reekum, A. G. Hoekstra, and P. M. A. Sloot.
Complexiteit van ziekten.
Nederlands Tijdschrift voor Geneeskunde
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Article
M. V. Sheraton, V. R. Melnikov, and P. M. A. Sloot.
Prediction and quantification of bacterial biofilm detachment using Glazier-Graner–Hogeweg method based model simulations.
Journal of Theoretical Biology
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Article
Z. Huang, E. Tan, E. Lum, P. Sloot, B. O. Boehm, and J. Car.
A Smartphone App to Improve Medication Adherence in Patients With Type 2 Diabetes in Asia.
JMIR mHealth and uHealth
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2018
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Article
D. Roy, B. Palavalli, N. Menon, R. King, K. Pfeffer, M. Lees, and P. M. A. Sloot.
Survey-based socio-economic data from slums in Bangalore, India.
Scientific Data
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Article
D. Roy, M. H. Lees, K. Pfeffer, and P. M. A. Sloot.
Spatial segregation, inequality, and opportunity bias in the slums of Bengaluru.
Cities : The International Journal of Urban Policy and Planning
pp. 269-276.
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Article
M. V. Sheraton, J. K. H. Yam, H. S. Oh, E. Mancini, L. Yang, S. A. Rice, and P. M. A. Sloot.
Mesoscopic Energy Minimization Drives Pseudomonas aeruginosa Biofilm Morphologies and Consequent Stratification of Antibiotic Activity Based on Cell Metabolism.
Antimicrobial Agents and Chemotherapy
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Article
R. Quax, G. Chliamovitch, A. Dupuis, J.-L. Falcone, B. Chopard, A. G. Hoekstra, and P. M. A. Sloot.
Information processing features can detect behavioral regimes of dynamical systems.
Complexity
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Article
J. Sienkiwicz, K. Soja, J. A. Holyst, and P. M. A. Sloot.
Categorical and Geographical Separation in Science.
Scientific Reports
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Article
E. Mancini, R. Quax, A. De Luca, S. Fidler, W. Stohr, and P. M. A. Sloot.
A study on the dynamics of temporary HIV treatment to assess the controversial outcomes of clinical trials: An in-silico approach.
PLoS ONE
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Article
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Article
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Article
A. Presbitero, E. Mancini, R. Brands, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
Supplemented alkaline phosphatase supports the immune response in patients undergoing cardiac surgery: Clinical and computational evidence.
Frontiers in Immunology
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Proceedings
J. S. Y. Tan, G. Závodszky, and P. M. A. Sloot.
Understanding Malaria Induced Red Blood Cell Deformation Using Data-Driven Lattice Boltzmann Simulations.
In:
Computational Science – ICCS 2018.
pp. 392-403.
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Proceedings
M. V. Sheraton and P. M. A. Sloot.
Parallel performance analysis of bacterial biofilm simulation models.
In:
Computational Science – ICCS 2018.
pp. 496-505.
2017
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Article
C. S. L. de Graaf, D. Kandhai, and P. M. A. Sloot.
Efficient Estimation of Sensitivities for Counterparty Credit Risk with the Finite Difference Monte Carlo Method.
Journal of Computational Finance
pp. 83-113.
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Chapter
P. M. A. Sloot.
More likely we would be ritually slaughtered.
In:
43 Visions for Complexity.
pp. 65-66.
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Article
V. A. Traag, R. Quax, and P. M. A. Sloot.
Modelling the distance impedance of protest attendance.
Physica A : Statistical Mechanics and its Applications
pp. 171-182.
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Article
R. Quax, O. Har-Shemesh, and P. M. A. Sloot.
Quantifying Synergistic Information Using Intermediate Stochastic Variables.
Entropy
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Article
D. Roy, M. H. Lees, K. Pfeffer, and P. M. A. Sloot.
Modelling the impact of household life cycle on slums in Bangalore.
Computers, Environment and Urban Systems
pp. 275-287.
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Article
J. Car, W. S. Tan, Z. Huang, P. Sloot, and B. D. Franklin.
eHealth in the future of medications management: personalisation, monitoring and adherence.
BMC Medicine
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Article
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Article
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Article
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Article
2016
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Proceedings
A. Presbitero, V. Krzhizhanovskaya, E. Mancini, R. Brands, and P. Sloot.
Reproducibility of Two Innate Immune System Models.
In:
Digital Transformation and Global Society.
pp. 501-514.
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Article
O. Har-Shemesh, R. Quax, B. Miñano, A. G. Hoekstra, and P. M. A. Sloot.
Nonparametric estimation of Fisher information from real data.
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
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Article
V. Viswanathan, M. Lees, and P. M. A. Sloot.
The influence of memory on indoor environment exploration: A numerical study.
Behavior Research Methods
pp. 621-639.
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Chapter
C. Donald Combs, S. R. Barham, and P. M. A. Sloot.
Systems Biology and Health Systems Complexity.
In:
The Digital Patient.
pp. 73-84.
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Article
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Article
A. Presbitero, V. Krzhizhanovskaya, E. Mancini, R. Brands, and P. Sloot.
Immune System Model Calibration by Genetic Algorithm.
Procedia Computer Science
pp. 161-171.
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Article
O. Har-Shemesh, R. Quax, A. G. Hoekstra, and P. M. A. Sloot.
Information geometric analysis of phase transitions in complex patterns: the case of the Gray-Scott reaction-diffusion model.
Journal of Statistical Mechanics : Theory and Experiment
.
2015
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Article
A. V. Boukhanovsky, V. A. Ilyin, V. V. Krzhizhanovskaya, G. A. Athanassoulis, A. A. Klimentov, and P. M. A. Sloot.
Young Researchers Advancing Computational Science: Perspectives of the Young Scientists Conference 2015.
Procedia Computer Science
pp. 1-4.
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Article
A. L. Pyayt, D. V. Shevchenko, A. P. Kozionov, I. I. Mokhov, B. Lang, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
Combining data-driven methods with finite element analysis for flood early warning systems.
Procedia Computer Science
pp. 2347-2356.
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Article
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Article
S. Mei, B. Chen, Y. Zhu, M. H. Lees, A. V. Boukhanovsky, and P. M. A. Sloot.
Simulating city-level airborne infectious diseases.
Computers, Environment and Urban Systems
pp. 97-105.
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Article
P. A. C. Duijn and P. M. A. Sloot.
From Data to Disruption.
Digital Investigation
pp. 39-45.
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Article
V. V. Krzhizhanovskaya, A. V. Dukhanov, A. Bilyatdinova, A. V. Boukhanovsky, and P. M. A. Sloot.
Russian-Dutch double-degree Master’s programme in computational science in the age of global education.
Journal of Computational Science
pp. 288-298.
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Article
S. Mei, N. Zarrabi, M. Lees, and P. M. A. Sloot.
Complex agent networks: An emerging approach for modeling complex systems.
Applied Soft Computing
pp. 311-321.
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Article
N. Melnikova, D. Jordan, V. Krzhizhanovskaya, and P. Sloot.
Numerical prediction of the IJkDijk trial embankment failure.
Proceedings of the Institution of Civil Engineers. Geotechnical Engineering
pp. 158-171.
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Article
V. R. Melnikov, V. V. Krzhizhanovskaya, A. V. Boukhanovsky, and P. M. A. Sloot.
Data-driven modeling of transportation systems and traffic data analysis during a major power outage in the Netherlands.
Procedia Computer Science
pp. 336-345.
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Article
E. Merelli, M. Rucco, P. Sloot, and L. Tesei.
Topological Characterization of Complex Systems: Using Persistent Entropy.
Entropy
pp. 6872-6892.
2014
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Proceedings
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Article
N. B. Melnikova, D. Jordan, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
Experimental Collapse of the IJkDijk: Numerical Prediction of Failure Mode and Posterior Sensor Data Analysis.
Canadian Geotechnical Journal
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Article
S. Mei, Y. Zhu, X. Qiu, X. Zhou, Z. Zu, A. V. Boukhanovsky, and P. M. A. Sloot.
Individual decision making can drive epidemics: a fuzzy cognitive map study.
IEEE Transactions on Fuzzy Systems
pp. 264-273.
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Article
W. Duan, R. Quax, M. Lees, X. Qiu, and P. M. A. Sloot.
Topology dependent epidemic spreading velocity in weighted networks.
Journal of Statistical Mechanics : Theory and Experiment
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Article
V. Viswanathan, C. E. Lee, M. H. Lees, S. A. Cheong, and P. M. A. Sloot.
Quantitative Comparison Between Crowd Models for Evacuation Planning and Evaluation.
The European Physical Journal B. Condensed Matter Physics
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Article
C. D. Erdbrink, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
Reducing cross-flow vibrations of underflow gates: experiments and numerical studies.
Journal of Fluids and Structures
pp. 25-48.
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Report
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Proceedings
A. Bilyatdinova, A. Dukhanov, K. Bochenina, A. V. Boukhanovsky, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
Dutch-Russian Double Degree Master's Program Curricula in Computational Science and High Performance Computing.
In:
2014 IEEE Frontiers in Education Conference.
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Article
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Article
L. J. Dijkstra, A. V. Yakushev, P. A. C. Duijn, A. V. Boukhanovsky, and P. M. A. Sloot.
Inference of the Russian drug community from one of the largest social networks in the Russian Federation.
Quality and Quantity
pp. 2739-2755.
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Article
A. L. Pyayt, A. P. Kozionov, I. I. Mokhov, B. Lang, R. J. Meijer, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
Time-frequency Methods for Structural Health Monitoring.
Sensors
pp. 5147-5173.
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Proceedings
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Article
Q. C. Bui, P. M. A. Sloot, E. M. van Mulligen, and J. A. Kors.
A novel feature-based approach to extract drug-drug interactions from biomedical text.
Bioinformatics
pp. 3365-3371.
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Article
A. L. Pyayt, A. P. Kozionov, V. T. Kusherbaeva, I. I. Mokhov, V. V. Krzhizhanovskaya, B. J. Broekhuijsen, R. J. Meijer, and P. M. A. Sloot.
Signal analysis and anomaly detection for flood early warning systems.
Journal of Hydroinformatics
pp. 1025-1043.
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Article
D. Roy, M. H. Lees, B. Palavalli, K. Pfeffer, and P. M. A. Sloot.
The emergence of slums: A contemporary view on simulation models.
Environmental Modelling & Software
pp. 76-90.
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Article
C. D. Erdbrink, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
Free-surface flow simulations for discharge-based operation of hydraulic structure gates.
Journal of Hydroinformatics
pp. 189-206.
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Article
P. A. C. Duijn, V. Kashirin, and P. M. A. Sloot.
The Relative Ineffectiveness of Criminal Network Disruption.
Scientific Reports
.
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Article
A. V. Dukhanov, V. V. Krzhizhanovskaya, A. Bilyatdinova, A. V. Boukhanovsky, and P. M. A. Sloot.
Double-degree Master's Program in Computational Science: Experiences of ITMO University and University of Amsterdam.
Procedia Computer Science
pp. 1433-1445.
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Article
S. A. Cheong, T. L. Tan, C.-C. Chen, W.-L. Chang, Z. Liu, L. Y. Chew, P. M. A. Sloot, and N. F. Johnson.
Short-Term Forecasting of Taiwanese Earthquakes Using a Universal Model of Fusion-Fission Processes.
Scientific Reports
.
2013
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Proceedings
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Article
N. B. Melnikova, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
Modeling Earthen Dike Stability: Sensitivity Analysis and Automatic Calibration of Diffusivities Based on Live Sensor Data.
Journal of Hydrology
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Article
I. Bartha, M. Assel, P. M. A. Sloot, M. Zazzi, C. Torti, E. Schülter, A. De Luca, A. Sönnerborg, A. B. Abecasis, K. Van Laethem, A. Rosi, J. Svärd, R. Paredes, D. A. M. C. van de Vijver, A.-M. Vandamme, and V. Müller.
Superinfection with drug-resistant HIV is rare and does not contribute substantially to therapy failure in a large European cohort.
BMC Infectious Diseases
p. 537.
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Article
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Article
V. V. Krzhizhanovskaya, N. B. Melnikova, A. M. Chirkin, S. V. Ivanov, A. V. Boukhanovsky, and P. M. A. Sloot.
Distributed Simulation of City Inundation by Coupled Surface and Subsurface Porous Flow for Urban Flood Decision Support System.
Procedia Computer Science
pp. 1046-1056.
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Article
A. Adamatzky, S. Akl, R. Alonso-Sanz, W. van Dessel, Z. Ibrahim, A. Ilachinski, J. Jones, A. V. D. M. Kayem, G. J. Martínez, P. de Oliveira, M. Prokopenko, T. Schubert, P. Sloot, E. Strano, and X.-S. Yang.
Are motorways rational from slime mould's point of view?.
International Journal of Parallel, Emergent and Distributed Systems
pp. 230-248.
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Article
A. L. Pyayt, A. P. Kozionov, I. I. Mokhov, B. Lang, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
An Approach for Real-time Levee Health Monitoring Using Signal Processing Methods.
Procedia Computer Science
pp. 2357-2366.
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Article
R. Quax, D. A. M. C. van de Vijver, D. Frentz, and P. M. A. Sloot.
Inferring epidemiological parameters from phylogenetic information for the HIV-1 epidemic among MSM.
The European Physical Journal - Special Topics
pp. 1347-1358.
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Article
P. M. A. Sloot, G. Kampis, and L. Gulyás.
Advances in dynamic temporal networks: understanding the temporal dynamics of complex adaptive networks.
The European Physical Journal - Special Topics
pp. 1287-1293.
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Article
B. E. Nichols, C. A. B. Boucher, J. H. van Dijk, P. E. Thuma, J. L. Nouwen, R. Baltussen, J. van de Wijgert, P. M. A. Sloot, and D. A. M. C. van de Vijver.
Cost-effectiveness of Pre-Exposure Prophylaxis (PrEP) in preventing HIV-1 infections in rural Zambia: a modeling study.
PLoS ONE
.
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Article
A. Adamatzky, M. Lees, and P. Sloot.
Bio-development of motorway networks in the Netherlands: a slime mould approach.
Advances in Complex Systems
.
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Article
L. B. Carey, D. van Dijk, P. M. A. Sloot, J. A. Kaandorp, and E. Segal.
Promoter sequence determines the relationship between expression level and noise.
PLoS Biology
.
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Article
N. Zarrabi, M. C. F. Prosperi, R. G. Belleman, S. Di Giambenedetto, M. Fabbiani, A. De Luca, and P. M. A. Sloot.
Combining social and genetic networks to study HIV transmission in mixing risk groups.
The European Physical Journal - Special Topics
pp. 1377-1387.
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Article
P. Libin, G. Beheydt, K. Deforche, S. Imbrechts, F. Ferreira, K. Van Laethem, K. Theys, A. P. Carvalho, J. Cavaco-Silva, G. Lapadula, C. Torti, M. Assel, S. Wesner, J. Snoeck, J. Ruelle, A. de Bel, P. Lacor, P. de Munter, E. van Wijngaerden, M. Zazzi, R. Kaiser, A. Ayouba, M. Peeters, T. de Oliveira, L. C. J. Alcantara, Z. Grossman, P. Sloot, D. Otelea, S. Paraschiv, C. Boucher, R. J. Camacho, and A.-M. Vandamme.
RegaDB: Community-driven data management and analysis for infectious diseases.
Bioinformatics
pp. 1477-1480.
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Article
N. Toth, L. Gulyas, R. O. Legendi, P. Duijn, P. M. A. Sloot, and G. Kampis.
The importance of centralities in dark network value chains.
The European Physical Journal - Special Topics
pp. 1413-1439.
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Article
A. Czaplicka, J. A. Holyst, and P. M. A. Sloot.
Noise enhances information transfer in hierarchical networks.
Scientific Reports
.
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Article
A. Czaplicka, J. A. Hołyst, and P. M. A. Sloot.
Stochastic resonance for information flows on hierarchical networks.
The European Physical Journal - Special Topics
pp. 1335-1345.
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Article
R. Quax, A. Apolloni, and P. M. A. Sloot.
The diminishing role of hubs in dynamical processes on complex networks.
Journal of the Royal Society Interface
.
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Article
R. Quax, D. Kandhai, and P. M. A. Sloot.
Information dissipation as an early-warning signal for the Lehman Brothers collapse in financial time series.
Scientific Reports
.
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Article
R. Quax, A. Apolloni, and P. M. A. Sloot.
Towards understanding the behavior of physical systems using information theory.
The European Physical Journal - Special Topics
pp. 1389-1401.
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Article
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Article
A. Bankhead, E. Mancini, A. C. Sims, R. S. Baric, S. McWeeney, and P. M. A. Sloot.
A simulation framework to investigate in vitro viral infection dynamics.
Journal of Computational Science
pp. 127-134.
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Proceedings
A. V. Yakushev, A. V. Boukhanovsky, and P. M. A. Sloot.
Topic Crawler for Social Networks Monitoring.
In:
Knowledge Engineering and the Semantic Web.
pp. 214-227.
2012
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Article
R. Quax, A. Apolloni, and P. M. A. Sloot.
Information processing reveals how microscopic components affect the macroscopic system-state in complex networks.
Scientific Reports
.
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Chapter
A. Adamatzky, M. Lees, and P. M. A. Sloot.
Physarum in the Netherlands: responding to the flood.
In:
Bioevaluation of world transport networks.
pp. 213-234.
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Chapter
A. Adamatzky, S. Akl, R. Alonso-Sanz, W. van Dessel, Z. Ibrahim, A. Ilachinski, J. Jones, A. V. D. M. Kayem, G. J. Martínez, P. de Oliveira, M. Prokopenko, T. Schubert, P. Sloot, E. Strano, and X.-S. Yang.
Biorationality of motorways.
In:
Bioevaluation of world transport networks.
pp. 309-325.
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Article
G. Qiu, D. Kandhai, N. F. Johnson, and P. M. A. Sloot.
Understanding complex dynamics in derivatives finance: why do options markets smile?.
Advances in Complex Systems
.
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Proceedings
C. D. Erdbrink, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
Controlling flow-induced vibrations of flood barrier gates with data-driven and finite-element modelling.
In:
Comprehensive flood risk management: research for policy and practice.
pp. 425-434.
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Article
Q. C. Bui and P. M. A. Sloot.
A robust approach to extract biomedical events from literature.
Bioinformatics
pp. 2654-2661.
-
Article
P. M. A. Sloot and R. Quax.
Information processing as a paradigm to model and simulate complex systems.
Journal of Computational Science
pp. 247-249.
-
Proceedings
A. Mordvintsev, V. Krzhizhanovskaya, M. Lees, and P. Sloot.
Simulation of city evacuation coupled to flood dynamics.
In:
PED 2012: accompanying booklet: abstracts of all presentations and posters: 6th International Conference on Pedestrian and Evacuation Dynamics.
pp. [156-158].
-
Article
N. Zarrabi, M. Prosperi, R. G. Belleman, M. Colafigli, A. De Luca, and P. M. A. Sloot.
Combining epidemiological and genetic networks signifies the importance of early treatment in HIV-1 transmission.
PLoS ONE
p. e46156.
-
Article
H. Ali, Y. Shi, D. Khazanchi, M. Lees, G. D. van Albada, J. Dongarra, and P. M. A. Sloot.
Empowering Science through Computing, preface for ICCS 2012.
Procedia Computer Science
pp. 1-6.
-
Article
E. Mancini, F. Gastiglione, M. Bernaschi, A. de Luca, and P. M. A. Sloot.
HIV reservoirs and immune surveillance evasion cause the failure of structured treatment interruptions: a computational study.
PLoS ONE
.
2011
-
Article
I. Altintas, M. K. Anand, T. Vuong, S. Bowers, B. Ludäscher, and P. M. A. Sloot.
A Data Model for Analyzing User Collaborations in Workflow-Driven eScience.
The International Journal of Computers and Their Applications (IJCA)
18(3), pp. 160-179.
-
Other: misc
M. C. F. Prosperi, M. Rosen-Zvi, A. Altmann, M. Zazzi, S. Di Giambenedetto, R. Kaiser, E. Schülter, D. Struck, P. M. A. Sloot, D. A. M. C. van de Vijver, A.-M. Vandamme, and A. Sönnerborg.
Correction: Antiretroviral Therapy Optimisation without Genotype Resistance Testing: A Perspective on Treatment History Based Models.
PLoS ONE
6(4).
-
Proceedings
Q. C. Bui and P. M. A. Sloot.
Extracting biological events from text using simple syntactic patterns.
In:
Proceedings of BioNLP Shared Task 2011 Workshop: Portland, Oregon, USA, 24 June, 2011.
pp. 143-146.
-
Article
S. Murtaza, A. G. Hoekstra, and P. M. A. Sloot.
Cellular automata simulations on a FPGA cluster.
International Journal of High Performance Computing Applications
pp. 193-204.
-
Article
L. Naumov, A. Hoekstra, and P. Sloot.
Cellular automata models of tumour natural shrinkage.
Physica A : Statistical Mechanics and its Applications
pp. 2283-2290.
-
Article
A. Bankhead, E. Mancini, A. C. Sims, R. S. Baric, S. McWeeney, and P. M. A. Sloot.
A simulation framework to investigate in vitro viral infection dynamics.
Procedia Computer Science
pp. 1798-1807.
-
Article
A. Mei Shan, R. Quax, D. van de Vijver, Y. Zhu, and P. M. A. Sloot.
Increasing risk behaviour can outweigh the benefits of antiretroviral drug treatment on the HIV incidence among men-having-sex-with-men in Amsterdam.
BMC Infectious Diseases
.
-
Article
Q. C. Bui, S. Katrenko, and P. M. A. Sloot.
A hybrid approach to extract protein-protein interactions.
Bioinformatics
pp. 259-265.
-
Article
R. Quax, D. A. Bader, and P. M. A. Sloot.
SEECN: simulating complex systems using dynamic complex networks.
International Journal for Multiscale Computational Engineering
pp. 201-214.
-
Article
I. Altintas, M. K. Anand, T. N. Vuong, S. Bowers, B. Ludäscher, and P. M. A. Sloot.
A data model for analyzing user collaborations in workflow-driven e-Science.
The International Journal of Computers and Their Applications (IJCA)
pp. 160-179.
-
Article
M. Sato, S. Matsuoka, G. D. van Albada, J. Dongarra, and P. M. A. Sloot.
Preface.
Procedia Computer Science
pp. 1-6.
-
Article
J. T. Mościcki, M. Lamanna, M. Bubak, and P. M. A. Sloot.
Processing moldable tasks on the grid: late job binding with lightweight user-level overlay.
Future Generation Computer Systems
pp. 725-736.
2010
-
Article
L. Naumov, A. Hoekstra, and P. Sloot.
The influence of mitoses rate on growth dynamics of a cellular automata model of tumour growth.
Procedia Computer Science
pp. 971-978.
-
Article
U. Schwiegelshohn, R. M. Badia, M. T. Bubak, M. Danelutto, S. Dustdar, F. Gagliardi, A. Geiger, L. Hluchy, D. Kranzlmüller, E. Laure, T. Priol, A. Reinefeld, M. Resch, A. Reuter, O. Rienhoff, T. Rüter, P. Sloot, D. Talia, K. Ullmann, R. Yahyapour, and G. von Voigt.
Perspectives on grid computing.
Future Generation Computer Systems
pp. 1104-1115.
-
Article
A. Sottoriva, J. J. C. Verhoeff, T. Borovski, S. K. McWeeney, L. Naumov, J. P. Medema, P. M. A. Sloot, and L. Vermeulen.
Cancer stem cell tumor model reveals invasive morphology and increased phenotypical heterogeneity.
Cancer Research
pp. 46-56.
-
Article
S. Mei, P. M. A. Sloot, R. Quax, Y. Zhu, and W. Wang.
Complex agent networks explaining the HIV epidemic among homosexual men in Amsterdam.
Mathematics and Computers in Simulation
pp. 1018-1030.
-
Chapter
J. Cui, J. A. Kaandorp, P. M. A. Sloot, and P. S. Thiagarajan.
Simulating Calcineurin-Centered Calcium Signaling Network in Cardiac Myocytes.
In:
Congestive heart failure: symptoms, causes and treatment.
pp. 111-127.
-
Article
D. van Dijk, G. Ertaylan, C. A. B. Boucher, and P. M. A. Sloot.
Identifying potential survival strategies of HIV-1 through virus-host protein interaction networks.
BMC Systems Biology
p. 96.
-
Chapter
A. G. Hoekstra, J. Kroc, and P. M. A. Sloot.
Introduction to modeling of complex systems using cellular automata.
In:
Simulating complex systems by cellular automata.
pp. 1-16.
-
Article
D. van Dijk, P. M. A. Sloot, J. C. Tay, and M. C. Schut.
Individual-based simulation of sexual selection: A quantitative genetic approach.
Procedia Computer Science
pp. 2003-2011.
-
Article
Q. C. Bui, B. Ó Nualláin, C. A. Boucher, and P. M. A. Sloot.
Extracting causal relations on HIV drug resistance from literature.
BMC Bioinformatics
p. 101.
-
Article
P. M. A. Sloot.
Computational science: A kaleidoscopic view into science.
Journal of Computational Science
p. 189.
-
Article
N. Zarrabi, E. Mancini, J. Tay, S. Shahand, and P. M. A. Sloot.
Modeling HIV-1 intracellular replication: two simulation approaches.
Procedia Computer Science
pp. 555-564.
-
Article
M. C. F. Prosperi, M. Rosen-Zvi, A. Altman, M. Zazzi, S. Di Giambenedetto, R. Kaiser, E. Schülter, D. Struck, P. Sloot, D. A. van de Vijver, A.-M. Vandamme, and A. Sönnerborg.
Antiretroviral therapy optimisation without genotype resistance testing: a perspective on treatment history based models.
PLoS ONE
p. e13753.
-
Article
-
Proceedings
I. Altintas, M. K. Anand, D. Crawl, S. Bowers, A. Belloum, P. Missier, B. Ludäscher, C. A. Goble, and P. M. A. Sloot.
Understanding collaborative studies through interoperable workflow provenance.
In:
Provenance and Annotation of Data and Processes.
pp. 42-58.
-
Article
A. Sottoriva, P. M. A. Sloot, J. P. Medema, and L. Vermeulen.
Exploring cancer stem cell niche directed tumor growth.
Cell Cycle
pp. 1472-1479.
-
Article
E. Zudilova-Seinstra, B. van Schooten, A. Suinesiaputra, R. van der Geest, B. van Dijk, J. Reiber, and P. Sloot.
Exploring individual user differences in the 2D/3D interaction with medical image data.
Virtual Reality
pp. 105-118.
-
Article
G. Qiu, D. Kandhai, and P. M. A. Sloot.
Modeling options markets by focusing on active tradersr.
Procedia Computer Science
pp. 2457-2462.
-
Article
S. Mei, D. van de Vijver, L. Xuan, Y. Zhu, and P. M. A. Sloot.
Quantitatively evaluating interventions in the influenza A (H1N1) epidemic on China campus grounded on individual-based simulations.
Procedia Computer Science
pp. 1675-1682.
-
Article
E. V. Zudilova-Seinstra, P. J. H. de Koning, A. Suinesiaputra, B. W. van Schooten, R. J. van der Geest, J. H. C. Reiber, and P. M. A. Sloot.
Evaluation of 2D and 3D glove input applied to medical image analysis.
International Journal of Human-Computer Studies
pp. 355-369.
-
Article
S. Jaeger, G. Ertaylan, D. van Dijk, U. Leser, and P. Sloot.
Inference of surface membrane factors of HIV-1 infection through functional interaction networks.
PLoS ONE
p. e13139.
-
Article
D. Frentz, C. A. B. Boucher, M. Assel, A. De Luca, M. Fabbiani, F. Incardona, P. Libin, N. Manca, V. Müller, B. Ó Nualláin, R. Paredes, M. Prosperi, E. Quiros-Roldan, L. Ruiz, P. M. A. Sloot, C. Torti, A.-M. Vandamme, K. Van Laethem, M. Zazzi, and D. A. M. C. van de Vijver.
Comparison of HIV-1 genotypic resistance test interpretation systems in predicting virological outcomes over time.
PLoS ONE
p. e11505.
-
Article
P. M. A. Sloot, G. D. van Albada, and J. Dongarra.
Preface.
Procedia Computer Science
pp. 1-2.
-
Chapter
J. L. Guisado, F. Jiménez-Morales, J. M. Guerra, F. Fernández de Vega, K. A. Iskra, P. M. A. Sloot, and D. Lombraña González.
Laser dynamics modelling and simulation: An application of dynamic load balancing of parallel cellular automata.
In:
Parallel and Distributed Computational Intelligence.
pp. 321-347.
-
Article
P. M. A. Sloot.
The cross-disciplinary road to true computational science.
Journal of Computational Science
p. 131.
2009
-
Proceedings
G. Allen, J. Nabrzyski, E. Seidel, G. D. van Albada, J. Dongarra, and P. M. A. Sloot.
In:
Computational Science - ICCS 2009: 9th International Conference, Baton Rouge, LA, USA, Proceedings, Part I.
ISBN
978-3-642-01969-2.
Lecture Notes in Computer Science
5544.
-
Proceedings
R. J. Strijkers, L. Y. L. Muller, M. L. Cristea, R. G. Belleman, C. T. A. M. de Laat, P. M. A. Sloot, and R. J. Meijer.
Interactive Control over a Programmable Computer Network Using a Multi-touch Surface.
In:
Computational Science - ICCS 2009: 9th International Conference, Baton Rouge, LA, USA, Proceedings, Part II.
ISBN
978-3-642-01972-2.
Lecture Notes in Computer Science
5545, pp. 719-728.
-
Proceedings
L. Caroprese, P. M. A. Sloot, B. Ó Nualláin, and E. Zumpano.
A logical framework for detecting anomalies in drug resistance algorithms.
In:
Proceedings of IDEAS'09.
pp. 23-30.
-
Article
J. Cui, J. A. Kaandorp, P. M. A. Sloot, C. M. Lloyd, and M. V. Filatov.
Calcium homeostasis and signaling in yeast cells and cardiac myocytes.
FEMS Yeast Research
pp. 1137-1147.
-
Proceedings
R. Strijkers, L. Muller, M. Cristea, R. Belleman, C. de Laat, P. Sloot, and R. Meijer.
Interactive control over a programmable computer network using a multi-touch surface.
In:
Computational Science – ICCS 2009.
pp. 719-728.
-
Proceedings
E. V. Zudilova-Seinstra, P. M. A. Sloot, P. J. H. de Koning, A. Suinesiaputra, R. J. van der Geest, and J. H. C. Reiber.
Exploring 2D/3D input techniques for medical image analysis.
In:
International Conference on Information Visualisation, track Biomedical Visualization (MediViz09), Barcelona, Spain.
pp. 147-152.
-
Article
M. Assel, D. van de Vijver, P. Libin, K. Theys, D. Harezlak, B. Ó Nualláin, P. Nowakowski, M. Bubak, A.-M. Vandamme, S. Imbrechts, R. Sangeda, T. Jiang, D. Frentz, and P. Sloot.
A collaborative environment allowing clinical investigations on integrated biomedical databases.
Studies in Health Technology and Informatics
pp. 51-61.
-
Article
A. Bossenbroek, A. Tirado-Ramos, and P. M. A. Sloot.
Grid resource allocation by means of option contracts.
IEEE Systems Journal
pp. 49-64.
-
Chapter
T. Gubala, M. Bubak, and P. M. A. Sloot.
Semantic Integration for Research Environments.
In:
Handbook of research on computational grid technologies for life sciences, biomedicine, and healthcare.
pp. 514-530.
-
Proceedings
R. Quax, D. A. Bader, and P. M. A. Sloot.
Simulating individual-based models of epidemics in hierarchical networks.
In:
Computational Science – ICCS 2009.
pp. 725-734.
-
Article
P. M. A. Sloot, P. V. Coveney, G. Ertaylan, V. Müller, C. A. Boucher, and M. Bubak.
HIV decision support: From molecule to man.
Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences
pp. 2691-2703.
-
Chapter
J. Kroc and P. M. A. Sloot.
Complex systems modeling by cellular automata.
In:
Encyclopedia of artificial intelligence.
pp. 353-360.
-
Article
L. Axner, A. G. Hoekstra, A. Jeays, P. Lawford, R. Hose, and P. M. A. Sloot.
Simulations of time harmonic blood flow in the Mesenteric artery: comparing finite element and lattice Boltzmann methods.
BioMedical Engineering OnLine
p. 23.
-
Article
P. M. A. Sloot.
Crisis computing: beslissingsondersteuning in een complexe wereld.
Magazine Nationale Veiligheid en Crisisbeheersing
pp. 62-63.
-
Article
S. Murtaza, A. G. Hoekstra, and P. M. A. Sloot.
Compute bound and I/O bound Cellular Automata simulations on FPGA logic.
ACM Transactions on Reconfigurable Technology and Systems
p. 23.
2008
-
Proceedings
M. T. Bubak, G. D. van Albada, J. Dongarra, and P. M. A. Sloot.
In:
Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part I.
ISBN
978-3-540-69383-3.
Lecture Notes in Computer Science
5101.
-
Proceedings
M. T. Bubak, G. D. van Albada, J. Dongarra, and P. M. A. Sloot.
In:
Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part II.
ISBN
978-3-540-69386-4.
Lecture Notes in Computer Science
5102.
-
Proceedings
M. T. Bubak, G. D. van Albada, J. Dongarra, and P. M. A. Sloot.
In:
Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part III.
ISBN
978-3-540-69388-8.
Lecture Notes in Computer Science
5103.
-
Chapter
A. G. Hoekstra, S. F. Portegies Zwart, M. T. Bubak, and P. M. A. Sloot.
Towards Distributed Petascale Computing.
In:
Petascale Computing: Algorithms and Applications.
ISBN
978-1-58488-909-0.
pp. 147-164.
-
Proceedings
B. Ó Nualláin, D. A. M. C. van de Vijver, C. A. B. Boucher, A. Tirado Ramos, and P. M. A. Sloot.
Enhanced Decision Support for HIV Drug Resistance Interpretation.
In:
Proceedings of the 6th European HIV Drug Resistance Workshop.
-
Proceedings
K. J. Rycerz, P. M. A. Sloot, and M. T. Bubak.
Dynamic Interactions in HLA Component Model for Multiscale Simulations.
In:
Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part II.
ISBN
978-3-540-69386-4.
Lecture Notes in Computer Science
5102, pp. 217-226.
-
Proceedings
K. Rycerz, M. Bubak, and P. M. A. Sloot.
Dynamic interactions in HLA component model for multiscale simulations.
In:
Computational Science – ICCS 2008.
pp. 217-226.
-
Article
J. L. Guisado, F. Fernández de Vega, F. Jiménez Morales, K. A. Iskra, and P. M. A. Sloot.
Using cellular automata for parallel simulation of laser dynamics with dynamic load balancing.
International Journal of High Performance Systems Architecture (IJHPSA)
pp. 251-259.
-
Proceedings
K. Rycerz, M. Bubak, and P. M. A. Sloot.
HLA component model on the example of multiscale simulation.
In:
Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings.
pp. 272-275.
-
Proceedings
S. Murtaza, A. G. Hoekstra, and P. M. A. Sloot.
Floating point based Cellular Automata simulations using a dual FPGA-enabled system.
In:
2008 Second International Workshop on High-Performance Reconfigurable Computing Technology and Applications (HPRCTA): proceedings: held in conjunction with SC 08, Austin, TX, November 17, 2008.
-
Article
P. Sloot, P. Coveney, M. T. Bubak, A.-M. Vandamme, B. Ó Nualláin, D. van de Vijver, and C. Boucher.
Multi-science decision support for HIV drug resistance treatment.
Studies in Health Technology and Informatics
pp. 188-198.
-
Article
P. Sloot, P. Coveney, M. T. Bubak, A.-M. Vandamme, B. Ó Nuallain, D. van de Vijver, and C. Boucher.
ViroLab: A collaborative decision support system in viral disease treatment.
Reviews in Antiviral Therapy
pp. 4-7.
-
Report
K. Rycerz, M. Bubak, P. M. A. Sloot, and V. Getov.
HLA component based environment for distributed multiscale simulations.
-
Article
V. V. Korkhov, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
A grid-based virtual reactor: Parallel performance and adaptive load balancing.
Journal of Parallel and Distributed Computing
pp. 596-608.
-
Proceedings
K. Rycerz, M. Bubak, and P. M. A. Sloot.
Using HLA and Grid for distributed multiscale simulations.
In:
Parallel Processing and Applied Mathematics.
pp. 780-787.
-
Proceedings
P. M. A. Sloot, A. Tirado-Ramos, G. Ertaylan, B. O Nuallain, D. van de Vijver, C. A. Boucher, and M. Bubak.
VIROLAB: A distributed decision support system for viral disease treatment.
In:
Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings.
pp. 33-34.
-
Proceedings
G. Ertaylan and P. M. A. Sloot.
A complex automata model of HIV-1 co-receptor tropism: Mutation rate prediction.
In:
Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings.
p. 85.
-
Article
P. Sloot.
ViroLab: From the molecule to the man.
eStrategies Projects
pp. 53-55.
-
Article
H.-C. Huang, A. Konagaya, V. Lanza, and P. M. A. Sloot.
Guest Editorial Introduction to the Special Section on BioGrid: Biomedical Computations on the Grid.
IEEE Transactions on Information Technology in Biomedicine
pp. 133-137.
-
Article
P. M. A. Sloot, S. V. Ivanov, A. V. Boukhanovsky, D. A. M. C. van de Vijver, and C. A. B. Boucher.
Stochastic simulation of HIV population dynamics through complex network modelling.
International Journal of Computer Mathematics
pp. 1175-1187.
-
Chapter
A. Tirado-Ramos, P. M. A. Sloot, and M. Bubak.
Gridbased interactive decision support in biomedicine.
In:
Grid computing for bioinformatics and computational biology.
pp. 225-246.
-
Article
Z. Guo, P. M. A. Sloot, and J. C. Tay.
A hybrid agent-based approach for modeling microbiological systems.
Journal of Theoretical Biology
pp. 163-175.
-
Proceedings
J. L. Guisado, F. Fernández de Vega, F. Jiménez Morales, K. A. Iskra, and P. M. A. Sloot.
Parallel Cellular Automata-based simulation of laser dynamics using dynamic load balancing.
In:
First International Workshop on Parallel Architectures and Bioinspired Algorithms.
pp. 49-55.
-
Proceedings
K. Rycerz, M. Bubak, and P. M. A. Sloot.
HLA component based environment for distributed multiscale simulations.
In:
From grids to service and pervasive computing.
pp. 229-239.
-
Proceedings
K. Rycerz, M. Bubak, P. Sloot, and V. Getov.
Problem solving environment for distributed interactive applications.
In:
Achievements in European research on grid systems: CoreGRID Integration Workshop 2006 (selected papers), October 19-20, Krakow, Poland.
pp. 55-66.
2007
-
Proceedings
W. Dubizky, A. Schuster, P. M. A. Sloot, M. Schroeder, and M. Romberg.
In:
Distributed, High-Performance and Grid Computing in Computational Biology.
ISBN
978-3-540-69841-8.
Lecture Notes in Computer Science
4360, pp. 1-190.
-
Report
K. J. Rycerz, M. T. Bubak, P. M. A. Sloot, and V. S. Getov.
Problem Solving Environment for Distributed Interactive Applications.
.
-
Article
G. Qiu, B. D. Kandhai, and P. M. A. Sloot.
Understanding the complex dynamics of stock markets through cellular automata.
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
p. 046116.
-
Article
L. Axner, J. Lätt, A. G. Hoekstra, B. Chopard, and P. M. A. Sloot.
Simulating Time Harmonic Flows with the Regularized L-BGK Method.
International Journal of Modern Physics C
pp. 661-666.
-
Proceedings
K. J. Rycerz, M. T. Bubak, M. Malawski, and P. M. A. Sloot.
Multiple HLA Federate Processes in Grid Environment.
In:
CGW'06 Proceedings.
pp. 293-294.
-
Proceedings
J. Mo'scicki, M. T. Bubak, H. C. Lee, A. Muraru, and P. M. A. Sloot.
Quality of Service on the Grid with User Level Scheduling.
In:
CGW'06 Proceedings.
pp. 119-129.
-
Article
K. J. Rycerz, A. Tirado Ramos, A. Gualandris, S. F. Portegies Zwart, M. T. Bubak, and P. M. A. Sloot.
Interactive N-Body simulations on the Grid: HLA versus MPI.
International Journal of High Performance Computing Applications
pp. 210-221.
-
Article
L. Axner, A. G. Hoekstra, and P. M. A. Sloot.
Simulating Time Harmonic Flows with the Lattice Boltzmann Method.
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
p. 036709.
-
Proceedings
M. T. Bubak, T. Gubala, M. Kasztelnik, M. Malawski, P. Nowakowski, and P. M. A. Sloot.
Collaborative Virtual Laboratory for e-Health.
In:
Expanding the Knowledge Economy: Issues, Applications, Case Studies, eChallenges e-2007 Conference Proceedings.
pp. 537-544.
-
Chapter
-
Chapter
P. M. A. Sloot, A. Tirado Ramos, and M. T. Bubak.
Multi-Science Decision Support for HIV Drug Resistance Treatment.
In:
Expanding the Knowledge Economy: Issues, Applications, Case Studies, eChallenges e-2007 Conference Proceedings.
pp. 597-606.
-
Chapter
A. G. Hoekstra, S. Portegies Zwart, M. Bubak, and P. M. A. Sloot.
Towards distributed petascale computing.
In:
Petascale computing: Algorithms and applications.
pp. 147-164.
-
Chapter
P. M. A. Sloot and A. G. Hoekstra.
Modeling Dynamic Systems with Cellular Automata.
In:
Handbook of Dynamic System Modeling.
pp. 21.1-21.19.
-
Report
P. M. A. Sloot, D. Frenkel, H. A. van der Vorst, A. van Kampen, H. Bal, P. Klint, R. M. M. Mattheij, J. van Wijk, J. Schaye, H.-J. Langevelde, R. H. Bisseling, B. Smit, E. Valenteyn, H. Sips, J. B. T. M. Roerdink, and K. G. Langedoen.
Computational e-Science: Studying complex systems in silico.
-
Proceedings
S. Murtaza, A. G. Hoekstra, and P. M. A. Sloot.
Performance evaluation of FPGA-based Cellular Automata accelerators.
In:
Proceedings of the Third Annual Reconfigurable Systems Summer Institute (RSSI'07).
-
Proceedings
G. Ertaylan and P. M. A. Sloot.
A complex automata model of HIV-1 co-receptor tropism: Understanding mutation rate pressure.
In:
Reviews in Antiretroviral Therapy.
-
Proceedings
S. Murtaza, A. G. Hoekstra, and P. M. A. Sloot.
Performance Modeling of 2D Cellular Automata on FPGA.
In:
International Conference on Field Programmable Logic and Applications, FPL 2007.
pp. 74-78.
-
Proceedings
V. V. Krzhizhanovskaya, Y. E. Gorbachev, M. A. Zatevakhin, and P. M. A. Sloot.
Virtual Reactor -- Computational Environment for Multidimensional Simulation of Plasma Chemical Processing.
In:
Proceedings of the XV International Conference on Computational Mechanics and Modern Applied Software Systems.
2006
-
Proceedings
V. N. Alexandrov, G. D. van Albada, P. M. A. Sloot, and J. Dongarra.
In:
Computational Science - ICCS 2006: 6th International Conference, Reading, UK, Proceedings, Part IV.
ISBN
978-3-540-34385-1.
Lecture Notes in Computer Science
3994.
-
Article
P. M. A. Sloot, I. Altintas, M. T. Bubak, C. Boucher, and A. Tirado Ramos.
From Molecule to Man: Decision Support in Individualized E-Health.
Computer
.
-
Article
A. M. Artoli, A. G. Hoekstra, and P. M. A. Sloot.
Optimizing lattice Boltzmann simulations for unsteady flows.
Computers & fluids
pp. 227-240.
-
Article
M. Scarpa, R. G. Belleman, P. M. A. Sloot, and C. T. A. M. de Laat.
Highly interactive distributed visualization.
Future Generation Computer Systems
pp. 896-900.
-
Proceedings
K. J. Rycerz, M. T. Bubak, P. M. A. Sloot, and V. S. Getov.
Problem solving environment for distributed interactive applications.
In:
Integrated Research in Grid Computing, Integration Workshop.
pp. 129-140.
-
Article
P. M. A. Sloot, A. Tirado Ramos, I. Altintas, M. T. Bubak, and C. A. Boucher.
From Molecule to Man: Decision Support in Individualized E-Health.
Computer
pp. 40-46.
-
Article
-
Proceedings
V. V. Krzhizhanovskaya, P. M. A. Sloot, and Y. E. Gorbachev.
Modeling of Plasma Chemical Deposition and Degradation of Silicon Thin Films.
In:
Fracture of Nano and Engineering Materials and Structures.
pp. 1347-1348.
-
Proceedings
L. Abrahamyan, J. M. Bernsdorf, T. Zeiser, P. Lammers, A. G. Hoekstra, and P. M. A. Sloot.
MPI parallelization and performance aspects of a graph based LB flow solver.
In:
Proceedings Discrete Simulation of Fluid Dynamics DSFD2006, Geneva, Switserland.
-
Article
-
Article
J. A. Vrugt, B. Ó Nualláin, B. A. Robinson, W. Bouten, S. C. Dekker, and P. M. A. Sloot.
Application of parallel computing to stochastic parameter estimation in environmental models.
Computers & Geosciences
pp. 1139-1155.
-
Proceedings
L. Abrahamyan, A. G. Hoekstra, and P. M. A. Sloot.
Choosing Optimal L-BGK Simulation Parameters for Time Harmonic Flows.
In:
Proceedings Discrete Simulation of Fluid Dynamics DSFD2006, Geneva, Switserland.
-
Proceedings
V. V. Krzhizhanovskaya, V. Korkhov, and P. M. A. Sloot.
Virtual Reactor: a distributed computing environment for simulation of plasma chemical processes on heterogeneous resources of the Grid.
In:
All-Russian conference "Scientific services on the Internet: Parallel Programming Technologies".
-
Proceedings
K. J. Rycerz, M. T. Bubak, M. Malawski, and P. M. A. Sloot.
Grid support for HLA-based collaborative environment for vascular reconstruction.
In:
2nd IEEE International Conference on e-Science and Grid Computing.
p. 48.
-
Proceedings
K. J. Rycerz, M. T. Bubak, M. Malawski, and P. M. A. Sloot.
A Grid Service for Management of Multiple HLA Federate Processes.
In:
Parallel Processing and Applied Mathematics: 6th International Conference (PPAM) 2005, Revised selected papers.
pp. 699-706.
-
Proceedings
A. Tirado Ramos and P. M. A. Sloot.
A Conceptual Grid Architecture for Interactive Biomedical Applications.
In:
19th IEEE International Symposium on Computer-Based Medical Systems (CBMS'06).
pp. 762-767.
-
Proceedings
V. V. Krzhizhanovskaya, V. V. Korkhov, A. Tirado-Ramos, D. J. Groen, I. V. Shoshmina, I. A. Valuev, I. V. Morozov, N. V. Malyshkin, Y. E. Gorbachev, and P. M. A. Sloot.
Computational Engineering on the Grid: Crafting a Distributed Virtual Reactor.
In:
E-Science 2006 : Second IEEE International Conference on e-Science and Grid Computing.
-
Article
A. M. M. Artoli, A. G. Hoekstra, and P. M. A. Sloot.
Mesoscopic simulations of systolic flow in the Human abdominal aorta.
Journal of Biomechanics
pp. 873-884.
-
Article
Peter Sloot.
To the readers of future generation computer systems.
Future Generation Computer Systems
p. 1.
2005
-
Other: misc
-
Proceedings
P. M. A. Sloot, C. A. B. Boucher, M. T. Bubak, A. G. Hoekstra, P. Plaszczak, A. Posthumus, D. A. M. C. van de Vijver, S. Wesner, and A. Tirado Ramos.
VIROLAB - A Virtual Laboratory for Decision Support in Viral Diseases Treatment.
In:
Cracow Grid Workshop 2005.
p. 33.
-
Article
-
Proceedings
V. S. Sunderam, G. D. van Albada, P. M. A. Sloot, and J. Dongarra.
In:
Computational Science - ICCS 2005: 5th International Conference, Atlanta, GA, USA, Proceedings, Part III.
ISBN
978-3-540-26044-8.
Lecture Notes in Computer Science
3516.
-
Proceedings
V. S. Sunderam, G. D. van Albada, P. M. A. Sloot, and J. Dongarra.
In:
Computational Science - ICCS 2005: 5th International Conference, Atlanta, GA, USA, Proceedings, Part II.
ISBN
978-3-540-26043-1.
Lecture Notes in Computer Science
3515.
-
Proceedings
V. S. Sunderam, G. D. van Albada, P. M. A. Sloot, and J. Dongarra.
In:
Computational Science - ICCS 2005: 5th International Conference, Atlanta, GA, USA, Proceedings, Part I.
ISBN
978-3-540-26032-5.
Lecture Notes in Computer Science
3514.
-
Article
A. Tirado Ramos, G. Tsouloupas, M. D. Dikaiakos, and P. M. A. Sloot.
Grid Resource Selection by Application Benchmarking: a Computational Haemodynamics Case Study.
Lecture Notes in Computer Science
pp. 534-543.
-
Article
J. M. Voogd, P. M. A. Sloot, and R. van Dantzig.
Equilibrium spherically curved two-dimensional Lennard-Jones systems.
Journal of Chemical Physics
pp. 1-5.
-
Proceedings
R. G. Belleman, P. M. A. Sloot, E. V. Zudilova-Seinstra, and A. Osseyran.
Simulation, visualisation, interaction and mixed reality: views of the University of Amsterdam and SARA.
In:
EU workshop on simulation, Visualisation, Interaction and Mixed Reality.
-
Proceedings
V. V. Krzhizhanovskaya, P. M. A. Sloot, and Y. E. Gorbachev.
Grid-based Simulation of Industrial Thin Film Production.
In:
SIMULATION: Transactions of The Society for Modeling and Simulation International.
pp. 77-85.
-
Report
P. M. A. Sloot, J. A. Kaandorp, A. G. Hoekstra, N. Ayache, J-P. Boissel, S. Brunak, G. Clapworthy, J Fingberg, G. Lonsdale, A. F. Frangi, G. Deco, P. Hunter, P. L. Nielsen, M. Halstead, R. Hose, I. Magnin, F. Martin-Sanchez, S. van Sint Jan, and M. Viceconti.
Towards Virtual Physiological Human: multilevel modelling and simulation of the human anatomy and phsyiology.
-
Proceedings
Z. Zhao, A. S. Z. Belloum, P. M. A. Sloot, and L. O. Hertzberger.
Agent technology and scientific workflow management in an e-Science environment.
In:
Proceedings of the 17th IEEE International conference on Tools with Artificial Intelligence.
pp. 19-23.
-
Chapter
A. Tirado Ramos, D. P. Shamonin, R. Shulakov, D. J. Groen, A. G. Hoekstra, G. D. van Albada, E. V. Zudilova-Seinstra, and P. M. A. Sloot.
Interactive Problem Solving Environments on the Grid for Image-based Computational Haemodynamics.
In:
The CrossGrid Book.
-
Proceedings
Z. Zhao, A. S. Z. Belloum, H. H. Yakali, and P. M. A. Sloot.
Dynamic Workflow in a Grid Enabled Problem Solving Environment.
In:
Proceedings of the 5th International Conference on Computer and Information Technology.
pp. 339-345.
-
Article
Z. Zhao, D. van Albada, and P. Sloot.
Agent-based flow control for HLA components.
Simulation
pp. 487-501.
-
Article
A. G. Hoekstra and P. M. A. Sloot.
Introducing Grid Speedup Gamma: A Scalability Metric for Parallel Applications on the Grid.
Lecture Notes in Computer Science
pp. 534-543.
-
Chapter
-
Proceedings
Z. Zhao, G. D. van Albada, and P. M. A. Sloot.
Rapid Prototyping of Complex Interactive Simulation Systems.
In:
Proceedings 10th IEEE International Conference on Engineering of Complex Computer Systems.
pp. 366-375.
-
Article
K. Rycerz, M. Bubak, M. Malawski, and P. Sloot.
A Framework for HLA-Based Interactive Simulations on the Grid.
Simulation
pp. 67-76.
-
Article
J. A. Kaandorp, P. M. A. Sloot, R. M. H. Merks, R. P. M. Bak, M. J. A. Vermeij, and C. Maier.
Morphogenesis of the branching reef coral Madracis mirabilis.
Proceedings of the Royal Society B-Biological Sciences
pp. 127-133.
-
Proceedings
A. Tirado Ramos, D. J. Groen, and P. M. A. Sloot.
On-line Application Performance Monitoring of Blood Flow Simulation in Computational Grid Architectures.
In:
Proceedings 18th IEEE Symposium on Computer-Based Medical Systems.
pp. 511-516.
-
Proceedings
K. Rycerz, M. T. Bubak, M. Malawski, and P. M. A. Sloot.
HLA Grid based support for simulation of vascular reconstruction.
In:
Proceedings of the CoreGRID Workshop "Integrated Research in Grid Computing".
pp. 165-174.
-
Article
K. A. Iskra, G. D. van Albada, and P. M. A. Sloot.
Towards Grid-Aware Time Warp.
Simulation
pp. 293-306.
-
Article
L. Abrahamyan, J. A. Schaap, A. G. Hoekstra, D. P. Shamonin, F. M. A. Box, R. J. van der Geest, J. H. C. Reiber, and P. M. A. Sloot.
A Problem Solving Environment for Image-Based Computational Hemodynamics.
Lecture Notes in Computer Science
pp. 287-294.
-
Article
T. A. Kvaloy, E. Rongen, A. Tirado Ramos, and P. M. A. Sloot.
Automatic Composition and Selection of Semantic Web Services.
Lecture Notes in Computer Science
pp. 184-192.
-
Proceedings
P. M. A. Sloot, A. V. Boukhanovsky, W. Keulen, and C. A. B. Boucher.
A Grid-based HIV Expert System.
In:
Proc. 5th International Symposium on Cluster Computing and Grid.
-
Article
Z. Zhao, A. S. Z. Belloum, P. M. A. Sloot, and L. O. Hertzberger.
Agent Technology and Generic Workflow Management in an e-Science Environment.
Lecture Notes in Computer Science
pp. 480-485.
-
Proceedings
Z. Zhao, A. S. Z. Belloum, A. Wibisono, F. Terpstra, P. T. Boer, P. M. A. Sloot, and L. O. Hertzberger.
Scientific workflow management: between generality and applicability.
In:
Proceedings of the International Workshop on Grid and Peer-to-Peer based Workflows in conjunction with the 5th International Conference on Quality Software.
-
Proceedings
A. Tirado Ramos, D. J. Groen, and P. M. A. Sloot.
Exploring OGSA Interoperability with LCG-based Production Grids for Biomedical Applications.
In:
Cracow Grid Workshop 2005.
-
Article
E. V. Zudilova-Seinstra and P. M. A. Sloot.
Bringing Combined Interaction to a Problem Solving Environment for Vascular Reconstruction.
Future Generation Computer Systems
pp. 1167-1176.
-
Article
P. M. A. Sloot, A. V. Boukhanovsky, W. Keulen, A. Tirado Ramos, and C. A. B. Boucher.
A Grid-Based Hiv Expert System.
Journal of Clinical Monitoring and Computing
pp. 263-278.
-
Proceedings
P. M. A. Sloot, C. A. Boucher, M. T. Bubak, A. G. Hoekstra, P. Plaszczak, A. Postumus, D. van de Vijver, S. Wesner, and A. Tirado Ramos.
VIROLAB - A virtual Laboratory for Decision Support in Viral Diseases Treatment.
In:
Cracow Grid Workshop.
2004
-
Proceedings
M. T. Bubak, G. D. van Albada, P. M. A. Sloot, and J. Dongarra.
Computational Science - ICCS 2004: 4th International Conference, Kraków, Poland, June 6-9, 2004, Proceedings, Part II.
ISBN
978-3-540-22115-9.
Lecture Notes in Computer Science
3037.
-
Proceedings
M. T. Bubak, G. D. van Albada, P. M. A. Sloot, and J. Dongarra.
Computational Science - ICCS 2004: 4th International Conference, Kraków, Poland, June 6-9, 2004, Proceedings, Part I.
ISBN
978-3-540-22114-2.
Lecture Notes in Computer Science
3036.
-
Proceedings
M. T. Bubak, G. D. van Albada, P. M. A. Sloot, and J. Dongarra.
Computational Science - ICCS 2004: 4th International Conference, Kraków, Poland, June 6-9, 2004, Proceedings, Part IV.
ISBN
978-3-540-22129-6.
Lecture Notes in Computer Science
3039.
-
Proceedings
M. T. Bubak, G. D. van Albada, P. M. A. Sloot, and J. Dongarra.
Computational Science - ICCS 2004: 4th International Conference, Kraków, Poland, June 6-9, 2004, Proceedings, Part III.
ISBN
978-3-540-22116-6.
Lecture Notes in Computer Science
3038.
-
Proceedings
P. M. A. Sloot, B. Chopard, and A. G. Hoekstra.
Cellular Automata: 6th International Conference on Cellular Automata for Research and Industry, ACRI 2004, Amsterdam, The Netherlands, October 25-28, 2004.
ISBN
978-3-540-23596-5.
Lecture Notes in Computer Science
3305.
-
Proceedings
K. Rycerz, B. Balis, R. Szymacha, M. T. Bubak, and P. M. A. Sloot.
Monitoring of HLA Grid Application Federates with OCM-G.
In:
Proceedings of the Eighth IEEE International Symposium on Distributed Simulation and Real-Time Applications.
pp. 125-132.
-
Proceedings
K. Zajac, A. Tirado-Ramos, Z. Zhao, P. M. A. Sloot, and M. Bubak.
Grid Services for HLA-based Distributed Simulation Frameworks.
In:
Grid computing.
pp. 147-154.
-
Article
E. V. Zudilova-Seinstra and P. M. A. Sloot.
Multi-modal Interaction in Biomedicine.
Lecture Notes in Computer Science
pp. 184-201.
-
Article
B. Leskes and P. M. A. Sloot.
Unlearning Phenomena in Co-evolution of Non-uniform Cellular Automata.
Lecture Notes in Computer Science
pp. 172-181.
-
Article
K. Rycerz, M. T. Bubak, M. Malawski, and P. M. A. Sloot.
Support for Effective and Fault Tolerant Execution of HLA-Based Applications in the OGSA Framework.
Lecture Notes in Computer Science
pp. 848-855.
-
Proceedings
V. V. Krzhizhanovskaya, Y. E. Gorbachev, and P. M. A. Sloot.
A Grid-Based Problem-Solving Environment for Simulation of Plasma Enhanced Chemical Vapor Deposition.
In:
Book of abstracts of the International conference "Distributed Computing and Grid Technologies in Science and Education".
pp. 89-90.
-
Article
D. P. Gavidia, E. V. Zudilova-Seinstra, and P. M. A. Sloot.
A Client-Server Engine for Parallel Computation of High-Resolution Planes.
Lecture Notes in Computer Science
pp. 970-977.
-
Article
-
Article
K. Zajac, M. T. Bubak, M. Malawski, and P. M. A. Sloot.
Execution and Migration Management of HLA-Based Interactive Simulations on the Grid.
Lecture Notes in Computer Science
pp. 872-879.
-
Proceedings
V. V. Krzhizhanovskaya, Y. E. Gorbachev, and P. M. A. Sloot.
A Grid-Based Problem-Solving Environment for Simulation of Plasma Enhanced Chemical Vapor Deposition.
In:
Proceedings of the International conference "Distributed Computing and Grid Technologies in Science and Education".
-
Proceedings
H. S. M. Cramer, V. Evers, E. V. Zudilova-Seinstra, and P. M. A. Sloot.
Usability Evaluation of a Simulated Vascular Reconstruction System.
In:
Proceedings of the VIRART Virtual Reality Design and Evaluation Workshop 2004.
-
Article
A. M. M. Artoli, D. Kandhai, H. C. J. Hoefsloot, A. G. Hoekstra, and P. M. A. Sloot.
Lattice BGK simulations of flow in a symmetric bifurcation.
Future Generation Computer Systems
pp. 909-916.
-
Proceedings
K. A. Iskra, G. D. van Albada, and P. M. A. Sloot.
Towards Grid-aware Time Warp.
In:
Proceedings of the 18th Workshop on Parallel and Distributed Simulation.
pp. 63-70.
-
Article
A. G. Hoekstra, J. van 't Hoff, A. M. M. Artoli, and P. M. A. Sloot.
Unsteady flow in a 2D elastic tube with the LBGK method.
Future Generation Computer Systems
pp. 917-924.
-
Article
A. Tirado Ramos, P. M. A. Sloot, A. G. Hoekstra, and M. T. Bubak.
An integrative approach to high-performance biomedical problem solving environments on the Grid.
Parallel Computing
pp. 1037-1055.
-
Proceedings
Y. E. Gorbachev, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
Using GRID technologies for simulation of complex physical-chemical systems.
In:
Proceedings of the XI All-Russian conference Telematika'2004.
pp. 165-167.
-
Article
K. J. Rycerz, M. T. Bubak, M. Malawski, and P. M. A. Sloot.
Interactive Grid Computing: Adapting High Level Architecture-based Applications to the Grid.
TASK Quarterly, Scientific Bulletin of the Academic Centre of Gdansk
pp. 549-559.
-
Proceedings
V. V. Krzhizhanovskaya, M. A. Zatevakhin, A. A. Ignatiev, Y. E. Gorbachev, W. J. Goedheer, and P. M. A. Sloot.
A 3D Virtual Reactor for Simulation of Silicon-Based Film Production.
In:
Proceedings of the 5th International Bi-Annual ASME/JSME Symposium on Computational Technologies forFluid/Thermal/Structural/Chemical Systems with Industrial Applications.
pp. 59-68.
-
Article
H. S. M. Cramer, V. Evers, E. V. Zudilova-Seinstra, and P. M. A. Sloot.
Context analysis to support development of virtual reality applications.
Virtual Reality
pp. 177-186.
-
Article
-
Proceedings
Peter M. A. Sloot, Alfredo Tirado-Ramos, Alfons G. Hoekstra, and Marian Bubak.
An interactive grid for non-invasive vascular reconstruction.
In:
2004 IEEE International Symposium on Cluster Computing and the Grid, CCGrid 2004.
pp. 309-319.
-
Proceedings
P. M. A. Sloot, A. Tirado-Ramos, A. G. Hoekstra, and M. Bubak.
An interactive grid environment for non-invasive vascular reconstruction.
In:
CCGrid 2004.
pp. 309-319.
-
Article
P. F. Spinnato, G. D. van Albada, and P. M. A. Sloot.
Performance modeling of distributed hybrid architectures.
IEEE Transactions on Parallel and Distributed Systems
pp. 81-92.
2003
-
Proceedings
P. M. A. Sloot, D. Abramson, A. V. Bogdanov, J. Dongarra, A. Y. Zomaya, and Y. E. Gorbachev.
Computational Science - ICCS 2003, Melbourne, Australia and St. Petersburg, Russia, Proceedings Part III.
ISBN
978-3-540-40196-4.
Lecture Notes in Computer Science
2659.
-
Proceedings
P. M. A. Sloot, D. Abramson, A. V. Bogdanov, J. Dongarra, A. Y. Zomaya, and Y. E. Gorbachev.
Computational Science - ICCS 2003, Melbourne, Australia and St. Petersburg, Russia, Proceedings Part IV.
ISBN
978-3-540-40197-1.
Lecture Notes in Computer Science
2660.
-
Article
A. M. M. Artoli, A. G. Hoekstra, and P. M. A. Sloot.
Accelerated Lattice BGK method for unsteady simulations through Mach number annealing.
International Journal of Modern Physics C
14(6), pp. 835-847.
-
Proceedings
I. Kiryukhin, K. Saskov, A. V. Boukhanovsky, W. Keulen, C. A. B. Boucher, and P. M. A. Sloot.
Stochastic Modeling of Temporal Variabilitiy of HIV-1 Population.
In:
Computational Science-ICCS 2003.
pp. 125-135.
-
Proceedings
-
Proceedings
K. A. Iskra, G. D. van Albada, and P. M. A. Sloot.
Time Warp Cancellation Optmisations on High Latency Networks.
In:
Proceedings Seventh IEEE International Symposium on Distributed Simulation and Real Time Applications (DS-RT 2003).
pp. 128-135.
-
Article
J. A. Kaandorp, E. A. Koopman, P. M. A. Sloot, R. P. M. Bak, M. J. A. Vermeij, and L. E. H. Lampmann.
Simulation and analysis of flow patterns around the scleractinian coral Madracis mirabilis (Duchassaing and Michelotti).
Philosophical Transactions of the Royal Society B - Biological Sciences
pp. 1551-1557.
-
Proceedings
A. G. Hoekstra, J. van 't Hoff, A. M. M. Artoli, and P. M. A. Sloot.
Lattice BGK Simulations of Unsteady Flow in a 2D Elastic Tube.
In:
Computational Science - ICCS 2003.
pp. 997-1006.
-
Proceedings
A. Tirado Ramos, K. Zajac, Z. Zhao, P. M. A. Sloot, G. D. van Albada, and M. T. Bubak.
Experimental Grid Access for Dynamic Discovery and Data Transfer in Distributed Interactive Simulation Systems.
In:
Computational Science - ICCS 2003, Proceedings Part I.
pp. 284-292.
-
Proceedings
E. V. Zudilova-Seinstra and P. M. A. Sloot.
Virtual Reality and Desktop as a Combined Interaction-Visualisation Medium for a Problem-Solving Environment.
In:
Computational Science - ICCS 2003, Proceedings Part III.
pp. 1025-1034.
-
Proceedings
P. F. Spinnato, S. F. Portegies Zwart, M. Fellhauer, G. D. van Albada, and P. M. A. Sloot.
Tools and Techniques for N-body Simulations.
In:
Memorie della Societa Astronomica Italiana Supplement.
p. 54.
-
Proceedings
K. Zajac, M. T. Bubak, M. Malawski, and P. M. A. Sloot.
Towards a Grid Management System for HLA-Based Interactive Simulations.
In:
Proceedings Seventh IEEE International Symposium on Distributed Simulation and Real Time Applications.
pp. 4-11.
-
Proceedings
R. M. H. Merks, A. G. Hoekstra, J. A. Kaandorp, and P. M. A. Sloot.
Branching and compactification in a model of coral growth: a critical reinvestigation of the effect of hydrodynamics.
In:
Mathematical modelling & Computing in Biology and Medicine; 5th ESMTB Conference 2002.
pp. 539-544.
-
Proceedings
P. M. A. Sloot, C. A. B. Boucher, I. Kiryukhin, K. Saskov, and A. V. Boukhanovsky.
A grid-based problem-solving environment for biomedicine.
In:
Proceedings of the First European HealthGrid Conference.
pp. 300-323.
-
Proceedings
Z. Zhao, G. D. van Albada, A. Tirado-Ramos, K. Zajac, and P. M. A. Sloot.
ISS-Studio: a prototype for a user-friendly tool for designing interactive experiments in Problem Solving Environments.
In:
Computational science - ICCS 2003.
pp. 679-688.
-
Proceedings
A. M. M. Artoli, B. D. Kandhai, H. C. J. Hoefsloot, A. G. Hoekstra, and P. M. A. Sloot.
Lattice Boltzmann, a robust and accurate solver for interactive computational hemodynamics.
In:
Computational Science - ICCS 2003.
pp. 1034-1043.
-
Article
A. M. M. Artoli, A. G. Hoekstra, and P. M. A. Sloot.
Simulation of a Systolic Cycle in a Realistic Artery with the Lattice Boltzmann BGK Method.
International Journal of Modern Physics C
pp. 95-98.
-
Proceedings
P. M. A. Sloot, G. D. van Albada, and E. V. Zudilova-Seinstra.
Grid-based Interactive Visualisation of Medical Images.
In:
Proceedings of the First European HealthGrid Conference.
pp. 57-66.
-
Article
R. Merks, A. Hoekstra, J. Kaandorp, and P. Sloot.
Models of coral growth: spontaneous branching, compactification and the Laplacian growth assumption.
Journal of Theoretical Biology
pp. 153-166.
-
Proceedings
K. A. Iskra, G. D. van Albada, and P. M. A. Sloot.
Time Warp cancellation optimizations on high latency networks.
In:
Proceedings - 7th IEEE International Symposium on Distributed Simulation and Real-Time Applications, DS-RT 2003.
pp. 128-135.
-
Article
2002
-
Proceedings
G. D. van Albada and P. M. A. Sloot.
Surfing the Grid - Dynamic Task Migration in the Polder Metacomputer Project.
In:
Proceedings of the 9th European PVM/MPI Users' Group Meeting on Recent Advances in Parallel Virtual Machine and Message Passing Interface.
ISBN
978-3-540-44296-7.
pp. 4-5.
-
Proceedings
R. M. H. Merks, A. G. Hoekstra, J. A. Kaandorp, and P. M. A. Sloot.
Branching and compactification in a model of coral growth: a critical reinvestigation of the effect of hydrodynamics.
In:
ECMTB2002: 5th Conference of the European Society of the Mathematical and Theoretical Biology, book of abstracts.
-
Proceedings
Z. Zhao, R. G. Belleman, G. D. van Albada, and P. M. A. Sloot.
Scenario Switches and State Updates in an Agent-based Solution to Constructing Interactive Simulation Systems.
In:
Proceedings of the Communication Networks and Distributed Systems Modeling and Simulation Conference (CNDS 2002).
pp. 3-10.
-
Proceedings
P. M. A. Sloot, F. Chen, and C. A. B. Boucher.
Cellular Automata Model of Drug Therapy for HIV Infection.
In:
5th International Conference on Cellular Automata for Research and Industry, ACRI 2002.
pp. 282-293.
-
Proceedings
P. F. Spinnato, G. D. van Albada, and P. M. A. Sloot.
A Versatile Simulation Model for Hiërarchical Treecodes.
In:
Computational Science - ICCS 2002, Proceedings Part I.
pp. 176-185.
-
Proceedings
-
Proceedings
V. V. Krzhizhanovskaya, M. A. Zatevakhin, A. A. Ignatiev, Y. E. Gorbachev, and P. M. A. Sloot.
Distributed Simulation of Silicon-Based Film Growth.
In:
Parallel Processing and Applied Mathematics, 4th International Conference, PPAM 2001, Naleczow, Poland.
pp. 879-887.
-
Proceedings
E. V. Zudilova-Seinstra and P. M. A. Sloot.
A First Step to a User-Centered Approach to a Development of Adaptive Simulation-Visualization Complexes.
In:
Proc. of the International Conference of the Systemics, Cybernetics and Informatics.
pp. 104-110.
-
Article
B. J. Overeinder, A. Schoneveld, and P. M. A. Sloot.
Self-Organized Criticality in Optimistic Simulation of Correlated Systems.
Parallel and Distributed Computing Practices
pp. 61-75.
-
Proceedings
P. F. Spinnato, G. D. van Albada, and P. M. A. Sloot.
Performance Modelling of Hiërarchical N-body Codes Running on Hybrid Architectures.
In:
ASCI 2002, Proceedings of the eight annual conference of the Advanced School for Computing and Imaging.
pp. 211-218.
-
Proceedings
Z. Zhao, R. G. Belleman, G. D. van Albada, and P. M. A. Sloot.
AG-IVE: an Agent based solution to constructing Interactive Simulation Systems.
In:
Computational Science - ICCS 2002, Proceedings Part I.
pp. 693-703.
-
Proceedings
P. M. A. Sloot, C. J. K. Tan, J. J. Dongarra, and A. G. Hoekstra.
Computational Science - ICCS 2002, Proceedings Part III.
In:
Lecture Notes in Computer Science.
-
Article
K. A. Iskra, R. G. Belleman, G. D. van Albada, J. Santoso, P. M. A. Sloot, H. E. Bal, H. J. W. Spoelder, and M. T. Bubak.
The Polder Computing Environment, a system for interactive distributed simulation.
Concurrency and Computation: Practice and Experience
pp. 1313-1335.
-
Proceedings
Z. Zhao, R. G. Belleman, G. D. van Albada, and P. M. A. Sloot.
Reusability and Efficiency in Constructing Interactive Simulation Systems.
In:
ASCI 2002, Proceedings of the eighth annual conference of the Advanced School for Computing and Imaging.
pp. 268-275.
-
Proceedings
A. M. M. Artoli, A. G. Hoekstra, and P. M. A. Sloot.
Accuracy of 2D pulsatile flow in the lattice Boltzmann BGK method.
In:
LNCS; Computational Science - ICCS 2002, Proceedings Part I.
pp. 361-370.
-
Article
A. M. M. Artoli, A. G. Hoekstra, and P. M. A. Sloot.
3D Pulsatile flow with the Lattice Boltzmann BGK Method.
International Journal of Modern Physics C
pp. 1119-1134.
-
Proceedings
P. F. Spinnato, S. F. Portegies Zwart, M. Fellhauer, G. D. van Albada, and P. M. A. Sloot.
Tools and techniques for N-body Simulations.
In:
Proceedings of the 1st workshop on Computational Astrophysics in Italy.
-
Article
R. G. Ghulghazaryan, N. S. Ananikian, and P. M. A. Sloot.
Yang-Lee zeros of the Q-state Potts model on recursive lattices.
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
pp. 1-9.
-
Article
B. D. Kandhai, D. Hlushkou, A. G. Hoekstra, P. M. A. Sloot, H. van As, and U. Tallarek.
Influence of Stagnant Zones on Transient and Asymptotic Dispersion in Macroscopically Homogeneous Porous Media.
Physical Review Letters
pp. 1-4.
-
Proceedings
K. A. Iskra, G. D. van Albada, and P. M. A. Sloot.
Rollbacks in Time Warp - Analysis and Modelling.
In:
ASCI 2002, Proceedings of the eighth annual conference of the Advanced School for Computing and Imaging.
pp. 88-94.
-
Article
R. M. H. Merks, A. G. Hoekstra, and P. M. A. Sloot.
The moment propagation method for advection-diffusion in the lattice Boltzmann method: validation and Péclet number limits.
Journal of computational Physics
pp. 563-576.
-
Chapter
R. G. Belleman and P. M. A. Sloot.
Dynamic Exploration Environments.
In:
Dealing with the data flood (mining data, text and multimedia.
pp. 771-787.
-
Article
M. T. Bubak, D Zbik, G. D. van Albada, K. A. Iskra, and P. M. A. Sloot.
Portable Library of Migratable Sockets.
Scientific Programming
pp. 211-222.
-
Proceedings
E. V. Zudilova-Seinstra, P. M. A. Sloot, and R. G. Belleman.
A Multi-modal Interface for an Interactive Simulated Vascular Reconstruction System.
In:
Fourth IEEE ACMI'02 International Conference on Multimodal Interfaces, Pittsburgh, Pennsylvania.
pp. 313-318.
-
Proceedings
P. M. A. Sloot, C. J. K. Tan, J. J. Dongarra, and A. G. Hoekstra.
Computational Science - ICCS 2002, Proceedings Part II.
In:
Lecture Notes in Computer Science.
-
Report
P. F. Spinnato, G. D. van Albada, and P. M. A. Sloot.
A Versatile Simulation Model for Hierarchical Treecodes.
-
Article
B. D. Kandhai, U. Tallarek, D. Hlushkou, A. G. Hoekstra, P. M. A. Sloot, and H. van As.
Numerical simulation and measurement of liquid hold-up in biporous media containing discrete stagnant zones.
Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences
pp. 521-534.
-
Proceedings
J. Santoso, G. D. van Albada, T. Basaruddin, and P. M. A. Sloot.
A Simulation Environment for Job Scheduling on Distributed Systems.
In:
Computational Science - ICCS 2002, Proceedings Part I.
pp. 653-662.
-
Article
H. Afsarmanesh, R. G. Belleman, A. S. Z. Belloum, A. Benabdelkader, J. F. J. van den Brand, G. B. Eijkel, A. Frenkel, C. Garita, D. L. Groep, R. M. A. Heeren, Z. W. Hendrikse, L. O. Hertzberger, J. A. Kaandorp, E. C. Kaletas, V. Korkhov, C. T. A. M. de Laat, P. M. A. Sloot, D. Vasunin, A. Visser, and H. H. Yakali.
VLAM-G: A Grid-based virtual laboratory.
Scientific Programming
pp. 173-181.
-
Proceedings
K. Zajac, M. Bubak, M. Malawski, P. M. A. Sloot, and A. Tirado-Ramos.
A Proposal of Services For Managing Interactive Grid Applications.
In:
Second Cracow Grid Workshop.
pp. 155-163.
-
Proceedings
Dick van Albada and Peter Sloot.
Surfing the grid - Dynamic task migration in the polder metacomputer project.
In:
Recent Advances in Parallel Virtual Machine and Message Passing Interface - 9th European PVM/MPI Users' Group Meeting, Proceedings.
pp. 4-5.
2001
-
Article
J. Santoso, G. D. van Albada, P. M. A. Sloot, and B. A. A. Nazief.
Simulation of Hierarchical Resource Management for Meta-computing Systems.
International Journal of Foundations of Computer Science (IJFCS)
12(5), pp. 629-643.
-
Chapter
P. M. A. Sloot and B. Chopard.
Modeling Fluid Flow using Lattice Gases and the Lattice Boltzmann Model.
In:
The algorithmic beauty of seaweeds, sponges and corals.
pp. 99-108.
-
Article
A. H. Weerts, B. D. Kandhai, W. Bouten, and P. M. A. Sloot.
Tortuosity of an Unsaturated Sandy Soil Estimated using Gas diffusion and Bulk Soil Electrical Conductivity: Comparing analogy-based Models and Lattice-Boltzmann Simulatons.
Soil Science Society of America Journal
pp. 1577-1584.
-
Proceedings
R. G. Belleman and P. M. A. Sloot.
Simulated vascular reconstruction in a virtual operating theatre.
In:
Computer Assisted Radiology and Surgery (Excerpta Medica, International Congress Series 1230).
pp. 938-944.
-
Proceedings
A. M. M. Artoli, B. D. Kandhai, H. G. Hoefsloot, A. G. Hoekstra, and P. M. A. Sloot.
Shear Stress in Lattice Boltzmann Simulations.
In:
Europhysics Conference on Computational Physics in series Publication Series of the John von Neumann Institute for computing.
p. A127.
-
Chapter
P. M. A. Sloot, J. A. Kaandorp, A. G. Hoekstra, and B. J. Overeinder.
Distributed Cellular Automata: Large Scale Simulation of Natural Phenomena.
In:
Solutions to Parallel and Distributed Computing Problems: Lessons from Biological Sciences.
pp. 1-46.
-
Proceedings
B. J. Overeinder, A. Schoneveld, and P. M. A. Sloot.
Spatio-Temporal Correlations and Rollback Distributions in Optimistic Simulations.
In:
Proceedings of the 15th Workshop on Parallel and Distributed Simulation.
pp. 145-152.
-
Proceedings
P. M. A. Sloot and A. G. Hoekstra.
Cellular Automata as a Mesoscopic Approach to Model and simulate Complex Systems.
In:
Proceedings of the 2001 International Conference on Computational Science ICCS 2001, in series LNCS volume 2074 (II).
pp. 518-527.
-
Article
J. A. Kaandorp and P. M. A. Sloot.
Morphological Models of Radiate Accretive Growth and the Influence of Hydrodynamics.
Journal of Theoretical Biology
pp. 257-274.
-
Proceedings
B. J. Overeinder, A. Schoneveld, and P. M. A. Sloot.
Spatio-Temporoal Correlations and Rollback Distributions in Optimistic Simulations.
In:
Proceedings of the 15th Workshop on Parllel and Distributed Simulation.
-
Article
P. F. Spinnato, G. D. van Albada, and P. M. A. Sloot.
Performance prediction of N-body simulations on a hybrid architecture.
Computer Physics Communications
pp. 34-44.
-
Article
-
Proceedings
Z. Zhao, R. G. Belleman, G. D. van Albada, and P. M. A. Sloot.
System integration for interactive simulation systems using intelligent agents.
In:
Proceedings of the 7th annual conference of the Advanced School for Computing and Imaging.
pp. 399-406.
-
Proceedings
P. M. A. Sloot, P. F. Spinnato, and G. D. van Albada.
N-body Simulation on Hybrid Architectures.
In:
Proceedings of the 2001 International Conference on Computational Science ICCS 2001, in series LNCS volume 2074 (II).
pp. 883-892.
-
Article
A. G. Hoekstra and P. M. A. Sloot.
Wall effects on density fluctuations in the GBL thermal lattice gas automaton.
Computer Physics Communications
pp. 151-154.
-
Proceedings
M. T. Bubak, D Zbik, G. D. van Albada, K. A. Iskra, and P. M. A. Sloot.
Migratable Sockets for Dynamic Load Balancing.
In:
Proceedings High Performance Computing and Networking (HPCN Europe 2001) in series LNCS volume 2110.
pp. 23-31.
-
Proceedings
P. F. Spinnato, G. D. van Albada, and P. M. A. Sloot.
A Simulator for Parallel Hybrid Computer Systems.
In:
Proceedings of the 7th annual conference of the Advanced School for Computing and Imaging.
pp. 210-219.
-
Proceedings
A. M. M. Artoli, A. G. Hoekstra, and P. M. A. Sloot.
Time dependent flow in a rigid tube using the Lattice Boltzmann Method.
In:
International Conference on Discrete Simulation of Fluid Dynamics in series Europhysics Conference Abstracts.
p. 3.
-
Proceedings
R. M. H. Merks, A. G. Hoekstra, and P. M. A. Sloot.
Validation of the Lowe-Frenkel tracer dispersion method in the lattice Boltzmann method.
In:
Europhysics Conference on Computational Physics, in series Publication series of the John von Neumann Institute for Computing.
p. A140.
-
Article
P. F. Spinnato, G. D. van Albada, and P. M. A. Sloot.
Performance of N-body Codes on Hybrid Machines.
Future Generation Computer Systems
pp. 951-959.
-
Proceedings
R. M. H. Merks, A. G. Hoekstra, and P. M. A. Sloot.
Validation of the Lowe-Frenkel tracer dispersion method in the lattice Botzmann method.
In:
Proceedings of the 7th annual conference of the Advanced School for Computing and Imaging.
pp. 137-141.
-
Article
A. G. Hoekstra, M. O. Frijlink, L. B. F. M. Waters, and P. M. A. Sloot.
Radiation forces in the discrete-dipole approximation.
Journal of the Optical Society of America. A, Optics, Image Science and Vision
pp. 1944-1953.
-
Proceedings
B. J. Overeinder, A. Schoneveld, and P. M. A. Sloot.
Spatio-Temporal Correlations and Rollback Distributions in Optimistic Simulations.
In:
Proceedings of the 7th annual conference of the Advanced School for Computing and Imaging.
pp. 391-398.
-
Article
P. M. A. Sloot, B. J. Overeinder, and A. Schoneveld.
Self-organized criticality in simulated correlated systems.
Computer Physics Communications
pp. 76-81.
2000
-
Article
H. E. Bal, R. A. F. Bhoedjang, R. F. H. Hofman, C. J. H. Jacobs, T. Kielmann, J. Maassen, R. van Nieuwpoort, J. Romein, L. Renambot, T. Rühl, R. Veldema, K. Verstoep, A. Baggio, G. Ballintijn, I. Kuz, G. Pierre, M. R. van Steen, A. S. Tanenbaum, G. Doornbos, D. Germans, H. J. W. Spoelder, E.-J. Baerends, S. van Gisbergen, H. Afsarmanesh, G. D. van Albada, A. S. Z. Belloum, D. Dubbeldam, Z. W. Hendrikse, L. O. Hertzberger, A. G. Hoekstra, K. A. Iskra, B. D. Kandhai, D. C. Koelma, F. van der Linden, B. J. Overeinder, P. M. A. Sloot, P. F. Spinnato, D. H. J. Epema, A. van Gemund, P. P. Jonker, A. Radulescu, C. van Reeuwijk, H. J. Sips, P. M. W. Knijnenburg, M. Lew, F. Sluiter, L. Wolters, H. Blom, and A. J. van der Steen.
The Distributed ASCI supercomputer project.
Operating Systems Review
34(4), pp. 76-96.
-
Article
K. A. Iskra, F. van der Linden, Z. W. Hendrikse, B. J. Overeinder, G. D. van Albada, and P. M. A. Sloot.
The implementation of Dynamite -- an environment for migrating PVM tasks.
Operating Systems Review
34(3), pp. 40-55.
-
Chapter
J. A. Kaandorp and P. M. A. Sloot.
Growth and Form of Sponges and Corals in a Moving Fluid.
In:
Pattern Formation in Biology, Vision and Dynamics.
ISBN
978-981-02-3792-9.
pp. 24-41.
-
Proceedings
P. F. Spinnato, G. D. van Albada, and P. M. A. Sloot.
Performance Analysis of Parallel N-body Codes.
In:
ASCI 2000, Proceedings of the sixth annual conference of the advanced School for Computing and Imaging.
pp. 213-220.
-
Proceedings
K. A. Iskra, Z. W. Hendrikse, G. D. van Albada, B. J. Overeinder, P. M. A. Sloot, and J. Gehring.
Experiments with migration of message passing tasks.
In:
Grid Computing--Grid 2000: The first IEEE/ACM International Workshop in volume 1971 van LNCS.
pp. 203-213.
-
Article
D. S. Claque, B. D. Kandhai, R. Zhang, and P. M. A. Sloot.
On the Hydraulic Permeability of (Un)Bounded Fibrous Media Using the Lattice-Boltzmann Method.
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
pp. 616-625.
-
Proceedings
K. A. Iskra, Z. W. Hendrikse, G. D. van Albada, B. J. Overeinder, and P. M. A. Sloot.
Dynamic Migration of PVM Tasks.
In:
ASCI 2000, Proceedings of the sixth annual conference of the Advanced School for Computing and Imaging.
pp. 206-212.
-
Article
R. Blaak and P. M. A. Sloot.
Lattice dependence of reaction-diffusion in lattice Boltzmann modelling.
Computer Physics Communications
pp. 256-266.
-
Article
A. Schoneveld, P. M. A. Sloot, M. Lees, and E. Karyadi.
A Framework for Dynamic Load Balancing: A Case Study on Explosive Containment Simulation.
Parallel Computing
pp. 737-751.
-
Chapter
-
Proceedings
M. T. Bubak, D Zbik, G. D. van Albada, K. A. Iskra, and P. M. A. Sloot.
Portable Library of Migratable Sockets.
In:
Proceedings of the SGI Users' Conference 2000.
pp. 175-184.
-
Proceedings
M. T. Bubak, W. Funika, D Zbik, G. D. van Albada, K. A. Iskra, P. M. A. Sloot, R. Wismüller, and K. Sowa-Pieklo.
Performance Measurement, Debugging and Load Balancing for Metacomputing.
In:
ISThmus 2000, Research and Development for the Information Society, Conference Proceedings.
pp. 409-418.
-
Proceedings
A. G. Hoekstra, M. O. Frijlink, and P. M. A. Sloot.
Calculation of the radiation forces on each dipole in the discrete dipole approximation.
In:
Light Scattering by Nonspherical Particles: Halifax Contributions.
pp. 237-240.
-
Article
D. Dubbeldam, A. G. Hoekstra, and P. M. A. Sloot.
Dynamic Structure Factor in Single and Two-Species Thermal GBL Lattice Gas.
Computer Physics Communications
pp. 13-20.
-
Proceedings
P. F. Spinnato, G. D. van Albada, and P. M. A. Sloot.
Performance Modelling of Hybrid Architectures.
In:
SIMAI 2000, Sommari--Abstracts.
pp. 73-74.
-
Chapter
A. G. Hoekstra and P. M. A. Sloot.
Biophysical and Biomedical Applications of Non-Spherical Scattering.
In:
Light Scattering by Nonspherical Particles, Theory Measurements and Applications.
pp. 585-602.
-
Proceedings
P. F. Spinnato, G. D. van Albada, and P. M. A. Sloot.
Performance Analysis of Parallel N-Body Codes.
In:
Proceedings of the HPCN 2000 Conference, in LNCS volume 1823.
pp. 249-260.
-
Proceedings
R. G. Belleman, Z. Zhao, G. D. van Albada, and P. M. A. Sloot.
Design considerations for the construction of immersive dynamic exploration environments.
In:
ASCI 2000, Proceedings of the sixth annual conference of the Advanced School for Computing and Imaging.
pp. 195-201.
-
Proceedings
J. Santoso, G. D. van Albada, B. A. A. Nazief, and P. M. A. Sloot.
Hiërarchical Job Scheduling for Clusters of Workstations.
In:
ASCI 2000, Proceedings of the sixth annual conference of the Advanced School for Computing and Imaging.
pp. 99-105.
-
Article
P. F. Spinnato, G. D. van Albada, and P. M. A. Sloot.
Performance Modelling of Hybrid Architectures.
Computer Physics Communications
.
-
Article
J. Santoso, G. D. van Albada, P. M. A. Sloot, and B. A. A. Nazief.
Simulation of Hiërarchical Resource Management for Meta-computing Systems.
International Journal of Foundations of Computer Science
pp. 629-643.
-
Chapter
A. G. Hoekstra and P. M. A. Sloot.
Distributed Particle Simulation of Flow in Complex Geometries.
In:
High Performance Computing in Engineering VI.
pp. 371-380.
-
Proceedings
K. A. Iskra, Z. W. Hendrikse, G. D. van Albada, B. J. Overeinder, and P. M. A. Sloot.
Experiments with Migration of PVM Tasks.
In:
ISThmus 2000, Research and Development for the Information Society, Conference Proceedings.
pp. 295-304.
-
Proceedings
K. A. Iskra, Z. W. Hendrikse, G. D. van Albada, B. J. Overeinder, and P. M. A. Sloot.
Performance Measurements on Dynamite/DPVM.
In:
Recent Advances in PVM and MPI - 7th European PVM/MPI User's Group Meeting, in series LNCS volume 1908.
pp. 27-38.
-
Proceedings
J. Santoso, G. D. van Albada, B. A. A. Nazief, and P. M. A. Sloot.
Simulating Job Scheduling for Clusters of Workstations.
In:
Proceedings of the HPCN 2000 Conference, in LNCS volume 1823.
pp. 395-406.
-
Article
-
Proceedings
R. G. Belleman and P. M. A. Sloot.
The Design of Dynamic Exploration Environments for Computational Steering Simulations.
In:
Proceedings of the SGI Users' Conference 2000.
pp. 57-74.
1999
-
Proceedings
R. G. Belleman, J. A. Kaandorp, D. Dijkman, and P. M. A. Sloot.
GEOPROVE: Geometric Probes for Virtual Environments.
In:
High-Performance Computing and Networking (HPCN Europe '99), Amsterdam, The Netherlands.
ISBN
978-3-540-65821-4.
Lecture Notes in Computer Science
pp. 817-827.
-
Proceedings
D. Dubbeldam, A. G. Hoekstra, and P. M. A. Sloot.
Computational Aspects of Multi-Species Lattice-Gas Automata.
In:
High-Performance Computing and Networking (HPCN Europe '99), Amsterdam, The Netherlands.
ISBN
978-3-540-65821-4.
Lecture Notes in Computer Science
pp. 339-349.
-
Proceedings
B. J. Overeinder and P. M. A. Sloot.
Extensions to Time Warp Parallel Simulation for Spatially Decomposed Applications.
In:
Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI, June 15--17, 1999.
pp. 118-124.
-
Proceedings
B. J. Overeinder and P. M. A. Sloot.
Extensions to Time Warp Parallel Simulation for Spatial Decomposed Applications.
In:
Proceedings of the Fourth United Kingdom Simulation Society Conference (UKSim 99).
pp. 67-73.
-
Proceedings
A. Schoneveld, M. Lees, E. Karyadi, and P. M. A. Sloot.
Dynamic Load Balancing in Parallel Finite Element Simulations.
In:
High-Performance Computing and Networking (HPCN Europe '99), Amsterdam, The Netherlands.
ISBN
978-3-540-65821-4.
Lecture Notes in Computer Science
pp. 409-419.
-
Proceedings
P. M. A. Sloot, J. A. Kaandorp, A. G. Hoekstra, and B. J. Overeinder.
Distributed Simulation with Cellular Automata: Architecture and Applications.
In:
SOFSEM'99 Theory and Practice of Informatics, Proceedings of 26th Seminar on Current Trends, in Theory and Practice of Informatics, Milovy, Czech Republic, November 27 - December 4.
ISBN
978-3-540-66694-3.
Lecture Notes on Computer Science
pp. 203-249.
-
Other: misc
D. Talia and P. M. A. Sloot.
Special Issue on Cellular Automata.
Future Generation Computer Systems
16(2--3), pp. 157-310.
-
Other: misc
P. M. A. Sloot.
De som der delen - inaugural address.
ISBN
978-90-5629-084-9.
-
Chapter
J. A. Kaandorp and P. M. A. Sloot.
Growth and form of sponges and corals in a moving fluid.
In:
Pattern Formation in biology, vision and dynamics.
pp. 24-41.
-
Article
-
Article
B. D. Kandhai, A. Koponen, A. G. Hoekstra, M. Kataja, J. Timonen, and P. M. A. Sloot.
Implementation aspects of 3d lattice-bgk: Boundaries, accuracy and a new fast relaxation method.
Journal of comparative physiology
pp. 482-501.
-
Proceedings
R. M. H. Merks, J. A. Kaandorp, and P. M. A. Sloot.
The interplay of hydrodynamics and genetic regulation in the morphogenesis of sponges and stony corals: pilot studies.
In:
Theory and Mathematics in Biology and Medicine: Abstracts.
p. 345.
-
Article
-
Proceedings
B. D. Kandhai, A. Koponen, A. G. Hoekstra, and P. M. A. Sloot.
Iterative momentum relaxation for fast lattice-boltzmann simulations.
In:
Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI, June 15-17, 1999.
pp. 274-278.
-
Proceedings
M. Bergman, G. D. van Albada, H. Simon, H. Buchner, P. M. A. Sloot, and V. Friedrich.
Brain activity and parallel computing.
In:
Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI, June 15-17, 1999.
pp. 44-45.
-
Article
-
Proceedings
P. M. A. Sloot and B. J. Overeinder.
Extensions to time warp parallel simulation for spatially decomposed applications.
In:
Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI.
pp. 118-124.
-
Article
D. Dubbeldam, A. G. Hoekstra, and P. M. A. Sloot.
Computational aspects of multispecies lattice-gas automata.
Lecture Notes in Computer Science
pp. 339-349.
-
Proceedings
A. Schoneveld, M. Lees, E. Karyadi, and P. M. A. Sloot.
Dynamic load balancing in parallel finite element simulations.
In:
Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI.
pp. 429-434.
-
Proceedings
G. D. van Albada, J. Clinckemaillie, A. H. L. Emmen, J. Gehring, O. Heinz, F. van der Linden, A. Reinefeld, P. M. A. Sloot, and B. J. Overeinder.
Dynamite-blasting obstacles to parallel cluster computing.
In:
Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI, june 15-17, 1999.
pp. 31-37.
-
Article
D. Talia and P. M. A. Sloot.
Cellular automata: Promise and prospects in computational science.
Future Generation Computer Systems
pp. v-vii.
-
Article
G. D. van Albada, J. Clinckemaillie, A. H. L. Emmen, J. Gehring, O. Heinz, F. van der Linden, B. J. Overeinder, A. Reinefeld, and P. M. A. Sloot.
Dynamite - blasting obstacles to parallel cluster computing.
Lecture Notes in Computer Science
pp. 300-310.
-
Proceedings
P. M. A. Sloot.
High performance simulation with cellular automata.
In:
Proceedings of HiPer'99, Tromso, Norway, june 27-30 1999.
pp. 169-207.
-
Proceedings
P. M. A. Sloot and B. J. Overeinder.
Time warped automata: Parallel discrete event simulation of asynchronous ca's.
In:
Proceedings of the Third International Conference on Parallel Processing and Applied Mathematics, Kazimierz Dolny, Poland, 14-17 september 1999.
pp. 43-62.
-
Article
D. Kandhai, D. J.-E. Vidal, A. G. Hoekstra, H. Hoefsloot, P. Iedema, and P. M. A. Sloot.
Lattice-Boltzmann and finite element simulations of fluid flow in a SMRX static mixer reactor.
International Journal for Numerical Methods in Fluids
pp. 1019-1033.
-
Chapter
P. M. A. Sloot.
Simulation and Visualisation in Medical Diagnosis: Perspectives and Computational Requirements.
In:
Advanced Infrastructures for Future Healthcare.
-
Proceedings
A. G. Hoekstra, M. O. Frijlink, D. de Kanter, and P. M. A. Sloot.
Two new applications of large scale dda simulations.
In:
Proceedings of the 4th Conference on Electromagnetic and light Scattering by Nonspherical Particles:Theory and Applications.
pp. 333-334.
-
Proceedings
D. Dubbeldam, A. G. Hoekstra, and P. M. A. Sloot.
Computational aspects of multispecies lattice-gas automata.
In:
Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI, June 15-17, 1999.
pp. 267-273.
-
Proceedings
B. J. Overeinder and P. M. A. Sloot.
Extensions to time warp parallel simulation for spatial decomposed applications.
In:
Proceedings of the Fourth United Kingdom Simulation Society Conference (UKSim 99).
p. 73.
-
Proceedings
R. G. Belleman, J. A. Kaandorp, D. Dijkman, and P. M. A. Sloot.
Geoprove: Geometric probes for virtual environments.
In:
Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI, June 15-17, 1999.
pp. 38-43.
-
Proceedings
P. F. Spinnato, G. D. van Albada, and P. M. A. Sloot.
Performance modelling of hybrid parallel systems.
In:
Proceedings of the TUG99 Meeting, Barcelona, Spain, Sept. 1999.
1998
-
Proceedings
B. D. Kandhai, D. Dubbeldam, A. G. Hoekstra, and P. M. A. Sloot.
Lattice Boltzmann hydrodynamics in Centrifugal Elutriation Chambers.
In:
Proceedings of the fourth annual conference of the Advanced School for Computing and Imaging.
pp. 269-274.
-
Article
A. G. Hoekstra, J. Rahola, and P. M. A. Sloot.
Accuracy of Internal Fields in Volume Integral Equation Simulations of Light Scattering.
Applied Optics
37, pp. 8482-8497.
-
Chapter
P. M. A. Sloot, M. T. Bubak, and L. O. Hertzberger.
Proceedings high-performance computing and networking (HPCN Europe '98 Amsterdam).
In:
Lecture notes in computer science.
-
Article
-
Proceedings
R. G. Belleman, J. A. Kaandorp, and P. M. A. Sloot.
Interactive environments for the exploration of large data sets.
In:
ASCI'98: proceedings of the fourth annual conference of the Advanced School for Computing and Imaging, Lommel, Belgium, June 9-11 1998.
pp. 264-268.
-
Article
P. M. A. Sloot, A. D. Pimentel, and L. O. Hertzberger.
Design issues for high performance simulation.
Simulation Practice and Theory
pp. 221-242.
-
Article
A. G. Hoekstra, M. D. Grimminck, and P. M. A. Sloot.
Large scale simulations of elastic light scattering by a fast dipole approximation.
International Journal of Modern Physics C
pp. 87-102.
-
Report
-
Article
A. W. van Halderen, B. J. Overeinder, P. M. A. Sloot, R. van Dantzig, D. J. H. Epema, and M. Livny.
Hierarchical resource management in the polder metacomputing initiative.
Parallel Computing
pp. 1807-1825.
-
Article
B. D. Kandhai, D. Vidal, A. G. Hoekstra, H. C. J. Hoefsloot, P. Iedema, and P. M. A. Sloot.
A comparison between lattice-boltzmann and finite element simulations of fluid flow in static mixer reactors.
International Journal of Modern Physics C
pp. 1123-1128.
-
Article
-
Article
A. G. Hoekstra, M. D. Grimminck, and P. M. A. Sloot.
Large scale simulations of elastic light scattering by a fast discrete dipole approximation.
International Journal of Modern Physics C
pp. 87-102.
-
Proceedings
D. Kandhai, D. Dubbeldam, A. G. Hoekstra, and P. M. A. Sloot.
Parallel lattice-Boltzmann simulation of fluid flow in centrifugal elutration chambers.
In:
High-Performance Computing and Networking.
pp. 173-182.
-
Proceedings
A. Hoekstra, J. Rahola, and P. Sloot.
Internal fields in volume integral equation simulations of light scattering: accuracy and resonances.
In:
Proceedings of conference on light scattering by nonspherical particles.
pp. 16-19.
-
Proceedings
B. D. Kandhai, D. Dubbeldam, A. G. Hoekstra, and P. M. A. Sloot.
Lattice boltzmann hydrodynamics in centrifugal elutriation chambers.
In:
ASCI'98 : proceedings of the fourth annual conference of the Advanced School for Computing and Imaging.
pp. 269-274.
-
Proceedings
A. Hoekstra and P. Sloot.
A parallel fast discrete dipole approximation for large scale simulations of elastic light scattering.
In:
ASCI'98 : proceedings of the fourth annual conference of the Advanced School for Computing and Imaging.
pp. 73-79.
-
Chapter
H. Buchner, S. Kaiser, P. M. A. Sloot, M. Fuchs, and K. Wassmuth.
EEG/MEG Quellen Rekonstruktion: die Funktionen von CURRY und CAUCHY-par.
In:
Bildverarbeitung für die Medizin 1998: Algorithmen - Systeme - Anwendungen.
pp. 455-459.
1997
-
Report
A. G. Hoekstra, W. Hoffmann, M. A. Kartawidjaja, B. J. Overeinder, J. Santoso, and P. M. A. Sloot.
A High Performance Simulation Environment, project status report.
.
-
Proceedings
J. F. de Ronde, G. D. van Albada, and P. M. A. Sloot.
High Performance Simulation of Gravitational Radiation Antennas.
In:
High Performance Computing and Networking.
Lecture Notes in Computer Science
1225, pp. 200-212.
-
Other: misc
P. M. A. Sloot and H. Liddell.
Special Issue on High Performance Computing and Networking Europe 1996.
Future Generation Computer Systems
12.
-
Article
J. M. Voogd, P. M. A. Sloot, and R. van Dantzig.
Symmetries of crystalline arrangements in spherical 2d lennard-jones systems.
Bulletin of the American Physical Society
p. 1601.
-
Chapter
J. F. de Ronde, G. D. van Albada, and P. M. A. Sloot.
High performance simulation of gravitational radiation antennas.
In:
High Performance Computing and Networking '97.
pp. 200-212.
-
Chapter
B. D. Kandhai, A. Koponen, A. G. Hoekstra, M. Kataja, J. Timonen, and P. M. A. Sloot.
Performance of a parallel 3d lattice boltzmann code for simulating fluid flow.
In:
International Workshop on Physics of Structurally Disordered Materials.
-
Chapter
J. A. Kaandorp and P. M. A. Sloot.
A mesoscopic model for simulating the combined effect of hydrodynamics and diffusion on nutrient driven growth processes.
In:
Proceedings of the international conference Multi-scale Phenomena and their Simulation conference.
pp. 250-254.
-
Chapter
A. Koponen, M. Kataja, J. Timonen, B. D. Kandhai, A. G. Hoekstra, and P. M. A. Sloot.
Fluid flow in three-dimensional random fibre webs.
In:
CSC News, High Performance Computing and Networking in Finland.
pp. 12-14.
-
Chapter
A. G. Hoekstra and P. M. A. Sloot.
Elastic light scattering from single biological cells.
In:
Progress in Electromagnetics Research Symposium 1997.
p. 583.
-
Article
J. F. de Ronde, G. D. van Albada, and P. M. A. Sloot.
Simulation of gravitational wave detectors.
Computers in Physics
pp. 484-497.
-
Chapter
A. G. Hoekstra, P. J. H. Brinkhorst, and P. M. A. Sloot.
First results of dda simulations of elastic light scattering by red blood cells.
In:
Proceedings Workshop on Light Scattering by Non-Spherical Particles (SCANOP).
pp. 39-40.
-
Article
B. J. Overeinder and P. M. A. Sloot.
Breaking the Curse of Dynamics by Task Migration: Pilot Experiments in the Polder Metacomputer.
Lecture Notes in Computer Science
pp. 194-207.
-
Article
-
Article
A. Schoneveld, J. F. de Ronde, and P. M. A. Sloot.
On the complexity of task allocation.
Complexity
pp. 52-60.
-
Article
-
Chapter
P. M. A. Sloot and H. Liddell.
Guest editorial, high performance computing and networking europe 1996.
In:
High performance computing and networking europe 1996.
-
Article
A. Schoneveld, J. F. de Ronde, and P. M. A. Sloot.
On the complexity of task allocation.
Complexity
pp. 52-60.
-
Chapter
A. Schoneveld, J. F. de Ronde, and P. M. A. Sloot.
Preserving locality for optimal parallelism in task allocation.
In:
High-Performance Computing and Networking.
pp. 565-574.
-
Article
A. Schoneveld, J. F. de Ronde, and P. M. A. Sloot.
Task allocation by parallel evolutionary computing.
Journal of Parallel and Distributed Computing
pp. 91-97.
-
Article
J. F. de Ronde, A. Schoneveld, and P. M. A. Sloot.
Load Balancing by Redundant Decomposition and Mapping.
Future Generation Computer Systems
pp. 391-407.
-
Proceedings
J. F. De Ronde, G. D. Van Albada, and P. M. A. Sloot.
High performance simulation for resonant-mass gravitational radiation antennas.
In:
High-Performance Computing and Networking - International Conference and Exhibition, Proceedings.
pp. 200-212.
1996
-
Proceedings
J. F. de Ronde, A. Schoneveld, and P. M. A. Sloot.
A genetic algorithm based tool for the mapping problem.
In:
ASCI'96: Proceedings of the 2nd annual conference of the Advanced School for Computing and Imaging.
pp. 174-179.
-
Report
J. F. de Ronde, A. Schoneveld, and P. M. A. Sloot.
Properties of the Task Allocation Problem.
-
Article
P. M. A. Sloot.
Editorial: Resource Management in Distributed Systems.
Future Generation Computer Systems
pp. 1-2.
-
Article
B. J. Overeinder, P. M. A. Sloot, R. N. Heederik, and L. O. Hertzberger.
A Dynamic Load Balancing System for Parallel Cluster Computing.
Future Generation Computer Systems
pp. 101-115.
-
Chapter
B. D. Kandhai, P. M. A. Sloot, and J. P. Huot.
Constrained migration of an atmospheric circulation model.
In:
HPCN Europe '96 Conference.
-
Chapter
A. G. Hoekstra and P. M. A. Sloot.
The Discrete Dipole Approximation - Possibilities and Problems to Simulate Elastic Light Scattering.
In:
Proceedings of the 1st Workshop on Electromagnetic and Light Scattering, Theory and Applications.
pp. 7-18.
-
Chapter
A. Schoneveld, J. F. de Ronde, P. M. A. Sloot, and J. A. Kaandorp.
A Parallel Cellular Genetic Algorithm Used in Finite Element Simulation.
In:
Parallel Problem Solving from Nature IV.
pp. 533-542.
-
Chapter
A. G. Hoekstra and P. M. A. Sloot.
Parallel Hierarchical Methods for Large Scale Simulations of Virtual Particle Models.
In:
ASCI 1996, Proceedings of the second annual conference of the Advanced School for Computing and Imaging.
pp. 49-53.
-
Chapter
P. M. A. Sloot and J. A. Kaandorp.
Particle modelling environment for dynamic complex system simulation.
In:
Biocomplexity and the essence of the living state.
pp. 83-85.
-
Chapter
P. M. A. Sloot, D. Frenkel, J. A. Kaandorp, and R. van Driel.
Modelling and simulation of reactivity, diffusion, and flow in biological systems using the lattice Boltzmann method.
In:
Biocomplexity and the essence of the living state.
pp. 80-82.
-
Article
J. A. Kaandorp, C. P. Lowe, D. Frenkel, and P. M. A. Sloot.
The effect of nutrient diffusion and flow on coral morphology.
Physical Review Letters
pp. 2328-2331.
-
Chapter
J. A. Kaandorp and P. M. A. Sloot.
Modelling and simulation of accretive growth and form on a parallel platform.
In:
ASCI '96, Proceedings of the second annual conference of the Advanced School for Computing and Imaging.
pp. 54-59.
-
Proceedings
J. F. de Ronde, A. Schoneveld, N. Floros, J. F. Reeve, and P. M. A. Sloot.
Loadbalancing by redundant decomposition and mapping.
In:
High-Performance Computing and Networking (HPCN Europe '96), Brussels, Belgium.
pp. 555-561.
-
Chapter
B. J. Overeinder, P. M. A. Sloot, R. N. Heederik, and L. O. Hertzberger.
A Dynamic Load Balancing System for Parallel Cluster Computing.
In:
Future Generation Computer Systems.
-
Chapter
J. A. Kaandorp and P. M. A. Sloot.
Modelling growth and form of marine sessile suspension feeders.
In:
Advances in Computational Life Sciences Vol. 1.
pp. 129-132.
-
Chapter
A. G. Hoekstra, M. D. Grimminck, and P. M. A. Sloot.
Simulating Light Scattering from micron-sized particles: A parallel Fast Discrete Dipole Approximation.
In:
Proceedings High Performance Computing and Networking Europe 1996.
pp. 269-275.
-
Proceedings
J. A. Kaandorp and P. M. A. Sloot.
Modelling diffusion and flow limited morphogenesis of marine sessile orginisms.
In:
3rd European conference of mathematics applied to biology and medicine.
-
Article
R. M. P. Doornbos, M. Schaeffer, A. G. Hoekstra, P. M. A. Sloot, B. G. de Grooth, and J. Greve.
Elastic Light Scattering Measurements of Single Biological Cells in an Optical Trap.
Applied Optics
pp. 729-734.
-
Chapter
J. F. de Ronde, A. Schoneveld, and P. M. A. Sloot.
A Genetic Algorithm Based Tool for the Mapping Problem.
In:
Proceedings of the second Annual Conference of the Advanced School for Computing and Imaging.
pp. 174-179.
-
Article
A. G. Hoekstra, P. M. A. Sloot, F. van der Linden, M. van Muiswinkel, J. J. J. Vesseur, and L. O. Hertzberger.
Native and Generic Parallel Programming Environments on a Transputer and a PowerPC Platform.
Concurrency
pp. 19-46.
-
Chapter
B. D. Kandhai, P. M. A. Sloot, and J. P. Huot.
Constrained migration of an atmospheric circulation model.
In:
High-performance computing and networking.
pp. 269-275.
-
Proceedings
B. D. Kandhai, P. M. A. Sloot, and J. P. Huot.
Constrained Migration: exploiting spatial locality.
In:
ASCI 1996 Conference Proceedings.
pp. 60-65.
-
Chapter
J. F. de Ronde, A. Schoneveld, P. M. A. Sloot, N. Floros, and J. Reeve.
Load Balancing by Redundant Decomposition and Mapping.
In:
High Performance Computing and Networking.
pp. 555-561.
-
Article
A. G. Hoekstra, L. O. Hertzberger, and P. M. A. Sloot.
The Optical `Fingerprints' of Cells: Catching the Bad Guys.
IEEE Computational Science and Engineering
pp. 4-5.
1995
-
Other: unpublished
-
Report
-
Report
J. F. de Ronde, A. W. van Halderen, and P. M. A. Sloot.
User scenario UvA tools.
.
-
Report
-
Other: misc
P. M. A. Sloot.
Special Issue on massive parallel computing.
Future Generation Computer Systems
11(2), pp. 113-200.
-
Article
-
Chapter
A. G. Hoekstra, P. M. A. Sloot, and L. O. Hertzberger.
Comparing the Parix and PVM parallel programming environments.
In:
ASCI '95: Proceedings of the first annual conference of the Advanced School for Computing and Imaging.
pp. 288-292.
-
Chapter
J. F. de Ronde and P. M. A. Sloot.
Concepts of Meta Modelling: A case study of code development for distributed memory architectures.
In:
Proceedings of the first annual conference of the Advanced School for Computing and Imaging, Heijen, The Netherlands.
pp. 175-184.
-
Report
-
Chapter
-
Report
A. W. van Halderen, J. F. de Ronde, and P. M. A. Sloot.
SAD/Parasol II, Joined Report.
-
Chapter
A. Schoneveld, J. A. Kaandorp, and P. M. A. Sloot.
Parallel Dynamical Complex Systems.
In:
PowerXplorer User Report, 1st edition.
pp. 152-156.
-
Chapter
P. M. A. Sloot and J. M. Voogd.
Simulated annealing: A trade-off between vector and parallel implementations.
In:
Transputer and Occam Engineering Series, Parallel Programming and Applications.
pp. 267-274.
-
Proceedings
J. M. Voogd and P. M. A. Sloot.
Simulated Annealing: Comparisons of Vector and Parallel Implementations.
In:
ASCI 1995 Conference Proceedings.
pp. 213-222.
-
Report
A. W. van Halderen, J. F. de Ronde, and P. M. A. Sloot.
F2SAD - prediction capabilities.
-
Report
J. M. Voogd, P. M. A. Sloot, R. van Dantzig, and D. Frenkel.
Crystallization on a Sphere.
-
Article
P. M. A. Sloot.
High Performance Simulation.
EUROSIM - Simulation News Europe
pp. 15-18.
-
Chapter
M. Bergman and P. M. A. Sloot.
Domain Decomposition by Parallel and Weighted RSB.
In:
ASCI'95 Proceedings of the first annual conference of the Advanced School for Computing and Imaging, Heijen, The Netherlands, May 16-18, 1995.
pp. 368-376.
-
Chapter
J. J. J. Vesseur, R. N. Heederik, B. J. Overeinder, and P. M. A. Sloot.
Experiments in Dynamic Load Balancing for Parallel Cluster Computing.
In:
Proceedings of the first annual conference of the Advanced School for Computing and Imaging.
pp. 417-421.
-
Article
P. M. A. Sloot.
Guest Editorial: Massive Parallel Computing.
Future Generation Computer Systems
pp. 113-114.
-
Proceedings
P. Sloot.
Modelling and Simulation.
In:
1994 CERN School of Computing.
pp. 177-226.
-
Chapter
A. G. Hoekstra, P. M. A. Sloot, and L. O. Hertzberger.
Comparing the Parix and PVM parallel programming environments.
In:
Proceedings of the Workshop on Parallel Programming and Computation (ZEUS '95) and the 4th Nordic Transputer Conference (NTUG '95).
pp. 13-17.
-
Report
J. F. de Ronde and P. M. A. Sloot.
CAMAS-TR-2.1.3.3 MAP progress report.
-
Report
A. W. van Halderen, P. M. A. Sloot, and J. J. J. Vesseur.
Parasol/SAD Final Report.
-
Report
B. J. Overeinder and P. M. A. Sloot.
Parallel Discrete Event Simulation Performance Modeling and Evaluation.
-
Chapter
J. A. Kaandorp and P. M. A. Sloot.
A parallel hybrid solver for diffusion limited growth.
In:
Parallel Programming and Applications Proceedings of the Workshop on Parallel Programming and Computation (ZEUS '95) and the 4th Nordic Transputer Conference (NTUG '95).
pp. 254-258.
-
Proceedings
A. D. Pimentel, J. van Brummen, T. Papathanassiadis, P. M. A. Sloot, and L. O. Hertzberger.
Mermaid: modelling and evaluation research in MIMD architecture design.
In:
Lecture Notes in Computer Science 919, High Performance Computing and Networking.
pp. 335-340.
-
Chapter
B. J. Overeinder, J. J. J. Vesseur, F. van der Linden, and P. M. A. Sloot.
A Communication Kernel for Parallel Programming Support on a Massively Parallel Processor System.
In:
Proceedings of the first annual conference of the Advanced School for Computing and Imaging.
pp. 157-164.
-
Chapter
B. J. Overeinder and P. M. A. Sloot.
Parallel Performance Evaluation through Critical Path Analysis.
In:
High-Performance Computing and Networking (HPCN Europe '95).
pp. 634-639.
-
Article
B. J. Overeinder and P. M. A. Sloot.
Parallel Discrete Event Simulation Performance Modelling and Evaluation.
PowerXplorer User Report, 1st edition
pp. 137-144.
-
Report
-
Chapter
A. D. Pimentel, L. O. Hertzberger, and P. M. A. Sloot.
Mermaid: Modelling and Evaluation Research in MIMD Architecture Design.
In:
PowerXplorer User Report, 1st edition.
pp. 145-151.
-
Chapter
J. J. J. Vesseur, R. N. Heederik, B. J. Overeinder, and P. M. A. Sloot.
Experiments in Dynamic Load Balancing for Parallel Cluster Computing.
In:
Proceedings of the Workshop on Parallel Programming and Computation (ZEUS'95) and the 4th Nordic Transputer Conference (NTUG'95).
pp. 189-194.
-
Report
J. F. de Ronde, A. Schoneveld, B. J. Overeinder, and P. M. A. Sloot.
MAP Final Report.
-
Report
-
Report
-
Chapter
-
Report
P. M. A. Sloot, J. A. Kaandorp, and A. Schoneveld.
Dynamic Complex Systems (DCS): A New Approach to Parallel Computing in Computational Physics.
-
Chapter
J. M. Voogd and P. M. A. Sloot.
Simulated Annealing: Comparison of Vector and Parallel Implementations.
In:
ASCI'95 Proceedings of the first annual conference of the Advanced School for Computing and Imaging.
pp. 213-222.
-
Report
J. M. Voogd, P. M. A. Sloot, and R. van Dantzig.
Kristallisatie op een boloppervlak.
-
Report
-
Report
J. F. de Ronde, A. W. van Halderen, and P. M. A. Sloot.
CAMAS-TR-2.3.5.1 User Scenario UvA tools.
-
Article
A. G. Hoekstra and P. M. A. Sloot.
Coupled Dipole Simulations of Elastic Light Scattering on Parallel Systems.
International Journal of Modern Physics C
pp. 663-679.
-
Proceedings
P. M. A. Sloot.
Modelling for Parallel Simulation: Possibilities and Pitfalls.
In:
Proceedings of the 1995 EUROSIM Conference, EUROSIM'95.
pp. 29-43.
-
Proceedings
A. G. Hoekstra, P. M. A. Sloot, and L. O. Hertzberger.
Comparing the Parix and PVM parallel programming enviroments.
In:
Transputer and Occam Engineering Series, Parallel Programming and Applications, Workshop Proceedings.
pp. 13-17.
-
Chapter
B. J. Overeinder, J. J. J. Vesseur, F. van der Linden, and P. M. A. Sloot.
A Communication Kernel for Parallel Programming Support on a Massively Parallel Processor System.
In:
Proceedings of the Workshop on Parallel Programming and Computation (ZEUS'95) and the 4th Nordic Transputer Conference (NTUG'95).
pp. 259-266.
-
Report
A. W. van Halderen, J. F. de Ronde, and P. M. A. Sloot.
Memory requirements of F2SAD.
-
Article
J. M. Voogd, P. M. A. Sloot, and R. v. Dantzig.
Comparison of vector and parallel implementations of the simulated annealing algorithm.
Future Generation Computer Systems
pp. 467-475.
1994
-
Report
M. Bergman and P. M. A. Sloot.
IPS Position Paper: Preconditioning for the Conjugate Gradient Method.
.
-
Report
-
Report
A. W. van Halderen, J. F. de Ronde, M. Beemster, and P. M. A. Sloot.
SAD Technical Report.
.
-
Report
A. W. van Halderen, J. F. de Ronde, M. Beemster, and P. M. A. Sloot.
SAD Progress Report.
.
-
Report
F. van der Linden, J. Petersen, and P. M. A. Sloot.
PVM/PARIX Progress Report.
.
-
Report
A. de Mes and P. M. A. Sloot.
Presentation on the status of Parasol.
.
-
Report
A. de Mes, M. Beemster, J. F. de Ronde, and P. M. A. Sloot.
Parasol I Technical Report.
.
-
Report
B. J. Overeinder, P. M. A. Sloot, and J. Petersen.
Finalization Report: Homogeneous PVM/PARIX.
.
-
Report
A. D. Pimentel, J. van Brummen, T. Papathanassiadis, P. M. A. Sloot, and L. O. Hertzberger.
Mermaid: modelling and evaluation research in MIMD Architecture Design.
.
-
Report
-
Report
-
Chapter
J. M. Voogd, R. Dantzig, and P. M. A. Sloot.
Two-dimensional Crystallisation on spherical surfaces.
In:
Proceedings of the 6th joint EPS-APS International Conference on Physics Computing.
pp. 463-466.
-
Chapter
P. M. A. Sloot, A. G. Hoekstra, and L. O. Hertzberger.
A Comparison of the Iserver-Occam, Parix, Express, and PVM Programming Environments on a Parsytec GCel.
In:
High Performance Computing and Networking, Volume II Networking and Tools.
pp. 253-259.
-
Chapter
J. F. de Ronde, A. W. van Halderen, A. de Mes, M. Beemster, and P. M. A. Sloot.
Automatic Performance Estimation of SPMD Programs on MPP.
In:
Massively Parallel Applications and Development.
pp. 381-388.
-
Article
A. G. Hoekstra and P. M. A. Sloot.
New Computational Techniques to Simulate Light Scattering from Arbitrary Particles.
Particle & Particle Systems Characterization
pp. 189-193.
-
Article
R. M. P. Doornbos, A. G. Hoekstra, K. E. I. Deurloo, B. G. de Grooth, P. M. A. Sloot, and J. Greve.
Lissajous-Like Patterns in Scatter Plots of Calibration Beads.
Cytometry
pp. 236-242.
-
Article
J. M. Voogd, P. M. A. Sloot, and R. Dantzig.
Crystallization on a Sphere.
Future Generation Computer Systems
pp. 359-361.
-
Article
A. G. Hoekstra, R. M. P. Doornbos, K. E. I. Deurloo, Herke Jan Noordmans, B. G. de Grooth, and P. M. A. Sloot.
Another face of Lorenz-Mie scattering.
Applied Optics
pp. 494-500.
-
Chapter
J. M. Voogd, P. M. A. Sloot, and R. Dantzig.
Simulated Annealing for N-body Systems.
In:
High Performance Computing and Networking, Volume I:Applications.
pp. 293-298.
-
Chapter
L. Dikken, F. van der Linden, J. J. J. Vesseur, and P. M. A. Sloot.
DynamicPVM: Dynamic Load Balancing on Parallel Systems.
In:
High Performance Computing and Networking, Volume II Networking and Tools.
pp. 273-277.
-
Article
J. F. de Ronde, P. M. A. Sloot, M. Beemster, and L. O. Hertzberger.
The CAMAS workbench: Computer Aided Migration of Applications System.
Future Generation Computer Systems
pp. 305-308.
1993
-
Report
-
Report
-
Report
J. F. de Ronde, M. Bergman, P. Trenning, and P. M. A. Sloot.
Application Simulator.
.
-
Report
J. F. de Ronde, A. W. van Halderen, M. Beemster, and P. M. A. Sloot.
SAD/Parasol II Progress Report.
.
-
Report
-
Report
-
Report
-
Report
P. M. A. Sloot, J. M. Voogd, D. de Kanter, and L. O. Hertzberger.
Simulated annealing: Comparison of vector and parallel implementations.
.
-
Report
-
Article
A. G. Hoekstra and P. M. A. Sloot.
Dipolar Unit Size in Coupled Dipole Calculations of the Scattering Matrix Elements Elements.
Optics Letters
pp. 1211-1213.
-
Proceedings
A. G. Hoekstra and P. M. A. Sloot.
New computational techniques to simulate Light Scattering from arbitrary particles.
In:
The 3rd International Congress on Optical Particle Sizing '93.
pp. 167-172.
-
Proceedings
B. J. Overeinder and P. M. A. Sloot.
Application of Time Warp to Parallel simulations with asynchronous cellular automata.
In:
European Simulation Symposium 1993.
pp. 397-402.
-
Proceedings
J. M. Voogd and P. M. A. Sloot.
Simulated annealing on H.P.C. systems: Applied to crystallization with spherical boundary conditions.
In:
European Simulation Symposium 1993.
pp. 371-376.
-
Proceedings
A. G. Hoekstra, R. M. P. Doornbos, K. E. I. Deurloo, H. J. Noordmans, B. G. de Grooth, and P. M. A. Sloot.
An unexpected signature of Lorenz-Mie scattering observed in FlowCytometric experiments.
In:
The 3rd International Congress on Optical Particle Sizing '93.
pp. 153-158.
-
Proceedings
G. Lonsdale, J. Clinckemaillie, S. Vlachoutsis, J. F. de Ronde, P. M. A. Sloot, N. Floros, and J. F. Reeve.
Crashworthiness simulation migration to distributed memory and MIMD machines.
In:
The 26th International Symposium on Automotive Technology and Automation.
pp. 237-244.
-
Proceedings
J. F. de Ronde, P. M. A. Sloot, M. Beemster, and L. O. Hertzberger.
A simulation methodology for the prediction of SPMD programs performance.
In:
European Simulation Symposium 1993.
pp. 24-25.
-
Article
P. M. A. Sloot and A. G. Hoekstra.
Light Scattering simulations on a massively parallel computer at the IC3A.
Transputer Applications
pp. 42-49.
-
Proceedings
A. G. Hoekstra and P. M. A. Sloot.
Implementation of a Parallel Conjugate Gradient Method for Simulation of Elastic Light.
In:
The 4th international conference Physics Computing '92.
pp. 345-346.
-
Proceedings
P. M. A. Sloot, A. ter Laak, P. Pandolfi, R. van Dantzig, and D. Frenkel.
Crystallization on a Sphere.
In:
The 4th international conference Physics Computing '92.
pp. 471-472.
-
Article
R. M. P. Doornbos, A. G. Hoekstra, K. E. I. Deurloo, B. G. de Grooth, P. M. A. Sloot, and J. Greve.
Polarization measurements in a Flow Cytometer; Lissajous Pattererns in scatter plots of calibrations beads.
Cytometry
.
-
Proceedings
A. G. Hoekstra and P. M. A. Sloot.
Simulating Elastic Light Scattering using High Performance Computing methods.
In:
European Simulation Symposium 1993.
pp. 462-467.
1992
-
Report
P. M. A. Sloot, A. G. Hoekstra, W. Hoffmann, and L. O. Hertzberger.
Time Complexity of a Parallel Conjugate Gradient Solver for Light Scattering Simulations: Theory and SPMD Implementation.
.
-
Chapter
-
Proceedings
B. J. Overeinder, P. M. A. Sloot, and L. O. Hertzberger.
Time Warp on a Transputer Platform: Pilot Study with Asynchronous Cellular Automata.
In:
Parallel Computing and Transputer Applications (PACTA 92).
pp. 1303-1312.
-
Proceedings
R. G. Belleman, P. M. A. Sloot, and L. O. Hertzberger.
Multivariate data processing system: transputer based data acquisition, analysis and presentation.
In:
Parallel Computing and Transputer Applications (PACTA 92).
pp. 1147-1155.
-
Article
P. M. A. Sloot and A. G. Hoekstra.
Implementation of a parallel conjugate gradient method for simulation of elastic light scattering.
Computers in Physics
pp. 323-323.
-
Proceedings
A. ter Laak, L. O. Hertzberger, and P. M. A. Sloot.
Nonconvex continuous optimization experiments on a transputer system.
In:
Transputer systems ongoing research.
pp. 251-265.
-
Chapter
P. M. A. Sloot.
Multiprocessing zorgt voor teamwork.
In:
PC+.
pp. 22-24.
-
Article
P. M. A. Sloot, A. ter Laak, P. Pandolfi, and R. van Dantzig.
Crystallization on a Sphere: Parallel Simulation on a Transputer Network.
Computers in Physics
pp. 307-308.
-
Proceedings
M. van Muiswinkel, L. H. Trip, and P. M. A. Sloot.
Parallel Sound Synthesis: Parallel Sonification of Multivariate data on a transputer platform.
In:
Parallel Computing and Transputer Applications (PACTA 92).
pp. 1156-1164.
-
Article
R. Graaff, J. G. Aarnoudse, J. R. Zijp, P. M. A. Sloot, F. F. M. de Mul, J. Greve, and M. H. Koelink.
Reduced light-scattering properties for mixtures off spherical particles: a simple approximation derived from Mie calculations.
Applied Optics
pp. 1370-1376.
1991
-
Proceedings
B. J. Overeinder, L. O. Hertzberger, and P. M. A. Sloot.
Parallel Discrete Event Simulation.
In:
The Third Workshop Computersystems.
pp. 19-30.
-
Article
A. G. Hoekstra, L. O. Hertzberger, and P. M. A. Sloot.
Simulation of Elastic Light Scattering on distributed memory machines.
Bulletin of the American Physical Society
pp. 1798-1798.
-
Chapter
-
Proceedings
A. G. Hoekstra, P. M. A. Sloot, M. J. Haan, and L. O. Hertzberger.
Time complexity analysis for distributed memory computers: Implementation of a parallel Conjugate Gradient method.
In:
Computing Science in the Netherlands.
pp. 249-266.
-
Article
A. G. Hoekstra, J. Aten, and P. M. A. Sloot.
The effect of aniosmotic media on the volume of the T-lymphocyte nucleus.
Biophysical Journal
pp. 765-774.
1990
-
Proceedings
P. M. A. Sloot and A. G. Hoekstra.
Arbitrarily-shaped particles measured in Flow-through systems.
In:
The 2nd internaltional congress on particle sizing.
pp. 605-611.
-
Proceedings
P. M. A. Sloot and A. G. Hoekstra.
Morphological characteristics of nucleated bloodcells studied by elastic light scattering.
In:
The 2nd international congress on particle sizing.
pp. 382-394.
1989
-
Proceedings
P. M. A. Sloot, M. J. Carels, and A. G. Hoekstra.
CACE: a case of Embedded System Development.
In:
Computing Science in the Netherlands.
pp. 441-462.
-
Article
P. M. A. Sloot, A. G. Hoekstra, H. van de Liet, and C. G. Figdor.
Scatter matrix elements of biological particles measured in a flow-through system: Theory and practice.
Applied Optics
pp. 1752-1762.
-
Article
P. M. A. Sloot and C. G. Figdor.
Ternary representation of trivariate data.
Cytometry
pp. 77-80.
-
Article
P. M. A. Sloot, H. van der Liet, A. G. Hoekstra, and C. G. Figdor.
Scattering matrix elements of biological particles measured in a flow through system: theory and practice.
Applied Optics
pp. 1752-1762.
1988
-
Article
P. M. A. Sloot, A. G. Hoekstra, and C. G. Figdor.
Osmotic response of lymphocytes measured by means of forward lightscattering: theoretical considerations.
Cytometry
pp. 636-641.
-
Article
P. M. A. Sloot, E. H. M. van der Donk, and C. G. Figdor.
Computer Assisted Centrifugal Elutriation. II.
Computer Methods and Programs in Biomedicine
pp. 37-46.
1987
-
Article
P. M. A. Sloot, P. Tensen, and C. G. Figdor.
Spectral analysis of flow cytometric data: design of a special purpose low-pass digital filter.
Cytometry
pp. 545-551.
-
Article
P. M. A. Sloot, M. J. Carels, P. Tensen, and C. G. Figdor.
Computer Assisted Centrifugal Elutriation. I.
Computer Methods and Programs in Biomedicine
pp. 179-188.
1986
-
Article
P. M. A. Sloot and C. G. Figdor.
Elastic light scattering from nucleated bloodcells: Rapid numerical analysis.
Applied Optics
p. 3559.