Show filters
2024
-
Article
J. F. Uleman, R. Quax, R. J. F. Melis, A. G. Hoekstra, and M. G. M. Olde Rikkert.
The need for systems thinking to advance Alzheimer's disease research.
Psychiatry Research
333, 115741.
2023
-
Article
A. O. Rydin, Y. Milaneschi, R. Quax, J. Li, J. A. Bosch, R. A. Schoevers, E. J. Giltay, B. W. J. H. Penninx, and F. Lamers.
A network analysis of depressive symptoms and metabolomics.
Psychological Medicine
53(15), pp. 7385-7394.
-
Article
J. F. Uleman, R. J. F. Melis, E. Ntanasi, N. Scarmeas, A. G. Hoekstra, R. Quax, and M. G. M. Olde Rikkert.
Simulating the multicausality of Alzheimer's disease with system dynamics.
Alzheimer's & Dementia
19(6), pp. 2633-2654.
-
Article
C. Hourican, G. Peeters, R. J. F. Melis, S. L. Wezeman, T. M. Gill, M. G. M. Olde Rikkert, and R. Quax.
Understanding multimorbidity requires sign-disease networks and higher-order interactions, a perspective.
Frontiers in Systems Biology
3, 1155599.
-
Article
V. Yildirim, V. M. Sheraton, R. Brands, L. Crielaard, R. Quax, N. A. W. van Riel, K. Stronks, M. Nicolaou, and P. M. A. Sloot.
A data-driven computational model for obesity-driven diabetes onset and remission through weight loss.
iScience
26(11), 108324.
-
Article
L. Crielaard, R. Quax, A. D. M. Sawyer, V. V. Vasconcelos, M. Nicolaou, K. Stronks, and P. M. A. Sloot.
Using network analysis to identify leverage points based on causal loop diagrams leads to false inference.
Scientific Reports
13(1), 21046.
-
Article
J. F. Uleman, R. J. F. Melis, A. G. Hoekstra, M. G. M. Olde Rikkert, and R. Quax.
Exploring the potential impact of multi-factor precision interventions in Alzheimer's disease with system dynamics.
Journal of Biomedical Informatics
145, 104462.
2022
-
Article
C. van Elteren, R. Quax, and P. Sloot.
Dynamic importance of network nodes is poorly predicted by static structural features.
Physica A : Statistical Mechanics and its Applications
593, 126889.
-
Article
K. den Nijs, J. Edivaldo, B. D. L. Châtel, J. F. Uleman, M. Olde Rikkert, H. Wertheim, and R. Quax.
A Global Sharing Mechanism of Resources.
International Journal of Environmental Research and Public Health
19(10), 5930.
-
Article
N. Merabet, P. J. Lucassen, L. Crielaard, K. Stronks, R. Quax, P. M. A. Sloot, S. E. la Fleur, and M. Nicolaou.
How exposure to chronic stress contributes to the development of type 2 diabetes.
Frontiers in Neuroendocrinology
65, 100972.
-
Article
L. Lang, P. Baudot, R. Quax, and P. Forré.
Information Decomposition Diagrams Applied beyond Shannon Entropy: A Generalization of Hu's Theorem.
2021
-
Article
J. Bruggeman, R. Sprik, and R. Quax.
Spontaneous cooperation for public goods.
Journal of Mathematical Sociology
45(3), pp. 183-191.
-
Article
J. F. Uleman, R. J. F. Melis, R. Quax, E. A. van der Zee, D. Thijssen, M. Dresler, O. van de Rest, I. F. van der Velpen, H. H. H. Adams, B. Schmand, I. M. C. M. de Kok, J. de Bresser, E. Richard, M. Verbeek, A. G. Hoekstra, E. A. J. A. Rouwette, and M. G. M. Olde Rikkert.
Mapping the multicausality of Alzheimer’s disease through group model building.
GeroScience
43(2), p. 829–843.
-
Article
E. Weinans, R. Quax, E. H. van Nes, and I. A. van de Leemput.
Evaluating the performance of multivariate indicators of resilience loss.
Scientific Reports
11, 9148.
-
Article
L. Crielaard, M. Nicolaou, A. Sawyer, R. Quax, and K. Stronks.
Understanding the impact of exposure to adverse socioeconomic conditions on chronic stress from a complexity science perspective.
BMC Medicine
19, 242.
-
Article
P. Dutta, R. Quax, L. Crielaard, L. Badiali, and P. M. A. Sloot.
Inferring temporal dynamics from cross-sectional data using Langevin dynamics.
Royal Society Open Science
8(11), 211374.
-
Article
J. F. Uleman, R. Quax, R. J. F. Melis, A. Hoekstra, and M. G. M. Olde Rikkert.
An individualized systems model to optimize Alzheimer’s disease prevention strategies.
Alzheimer's & Dementia
17(S10), e050885.
2020
-
Article
J. J. Lever, I. A. van de Leemput, E. Weinans, R. Quax, V. Dakos, E. H. van Nes, J. Bascompte, and M. Scheffer.
Foreseeing the future of mutualistic communities beyond collapse.
Ecology Letters
23(1), pp. 2-15.
-
Article
J. Burger, D. C. van der Veen, D. J. Robinaugh, R. Quax, H. Riese, R. A. Schoevers, and S. Epskamp.
Bridging the gap between complexity science and clinical practice by formalizing idiographic theories: a computational model of functional analysis.
BMC Medicine
18, 99.
-
Article
L. Crielaard, P. Dutta, R. Quax, M. Nicolaou, N. Merabet, K. Stronks, and P. M. A. Sloot.
Social norms and obesity prevalence: From cohort to system dynamics models.
Obesity Reviews
21(9), e13044.
-
Article
O. Har-Shemesh, R. Quax, J. S. Lansing, and P. M. A. Sloot.
Questionnaire data analysis using information geometry.
Scientific Reports
10, 8633.
-
Proceedings
B. Nannes, R. Quax, H. Ashikaga, M. Hocini, R. Dubois, O. Bernus, and M. Haïssaguerre.
Early signs of critical slowing down in heart surface electrograms of ventricular fibrillation victims.
In:
Computational Science – ICCS 2020.
ISBN
9783030504236.
IV, pp. 334-347.
-
Proceedings
A. Presbitero, R. Quax, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
Detecting critical transitions in the human innate immune system post-cardiac surgery.
In:
Computational Science – ICCS 2020.
ISBN
9783030503710.
I, pp. 371-384.
-
Article
J. Uleman, R. J. F. Melis, A. Hoekstra, R. Quax, and M. G. M. Olde Rikkert.
Uncovering the multicausality of Alzheimer’s disease: A systems modeling approach.
Alzheimer's & Dementia
16(S10), e041105.
2019
-
Article
W. R. J. Vermeulen, D. Roy, and R. Quax.
Modelling the Influence of Regional Identity on Human Migration.
Urban Science
3(3), 78.
-
Article
J. Runge, S. Bathiany, E. Bollt, G. Camps-Valls, D. Coumou, E. Deyle, C. Glymour, M. Kretschmer, M. D. Mahecha, J. Muñoz-Marí, E. H. van Nes, J. Peters, R. Quax, M. Reichstein, M. Scheffer, B. Schölkopf, P. Spirtes, G. Sugihara, J. Sun, K. Zhang, and J. Zscheischler.
Inferring causation from time series in Earth system sciences.
Nature Communications
10, 2553.
-
Article
A. Presbitero, E. Mancini, F. Castiglione, V. V. Krzhizhanovskaya, and R. Quax.
Game of neutrophils: modeling the balance between apoptosis and necrosis.
BMC Bioinformatics
20(Supplement 6), 475.
-
Article
E. Weinans, J. J. Lever, S. Bathiany, R. Quax, J. Bascompte, E. H. van Nes, M. Scheffer, and I. A. van de Leemput.
Finding the direction of lowest resilience in multivariate complex systems.
Journal of the Royal Society Interface
16(159), 20190629.
2018
-
Article
R. Quax, G. Chliamovitch, A. Dupuis, J.-L. Falcone, B. Chopard, A. G. Hoekstra, and P. M. A. Sloot.
Information processing features can detect behavioral regimes of dynamical systems.
Complexity
2018, 6047846.
-
Article
E. Mancini, R. Quax, A. De Luca, S. Fidler, W. Stohr, and P. M. A. Sloot.
A study on the dynamics of temporary HIV treatment to assess the controversial outcomes of clinical trials: An in-silico approach.
PLoS ONE
13(7), e0200892.
-
Proceedings
A. Presbitero, E. Mancini, F. Castiglione, V. V. Krzhizhanovskaya, and R. Quax.
Evolutionary Game Theory Can Explain the Choice Between Apoptotic and Necrotic Pathways in Neutrophils.
In:
Proceedings 2018 IEEE International Conference on Bioinformatics and Biomedicine .
ISBN
9781538654880, 9781538654873.
pp. 1401-1405.
-
Proceedings
M. Glombek, J. R. Helmus, M. Lees, R. van den Hoed, and R. Quax.
Vulnerability Of Charging Infrastructure, A Novel Approach For Improving Charging Station Deployment.
In:
Proceedings of 7th Transport Research Arena TRA 2018.
2017
-
Article
V. A. Traag, R. Quax, and P. M. A. Sloot.
Modelling the distance impedance of protest attendance.
Physica A : Statistical Mechanics and its Applications
468, pp. 171-182.
-
Article
R. Quax, O. Har-Shemesh, and P. M. A. Sloot.
Quantifying Synergistic Information Using Intermediate Stochastic Variables.
Entropy
19(2), 85.
-
Article
A. Presbitero, R. Quax, V. Krzhizhanovskaya, and P. Sloot.
Anomaly Detection in Clinical Data of Patients Undergoing Heart Surgery.
Procedia Computer Science
108, pp. 99-108.
2016
-
Article
O. Har-Shemesh, R. Quax, B. Miñano, A. G. Hoekstra, and P. M. A. Sloot.
Nonparametric estimation of Fisher information from real data.
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
93(2), 023301.
-
Article
J. T. I. Tanzil, J. N. Lee, B. E. Brown, R. Quax, J. A. Kaandorp, J. M. Lough, and P. A. Todd.
Luminescence and density banding patterns in massive Porites corals around the Thai-Malay Peninsula, Southeast Asia.
Limnology and Oceanography
61(6), pp. 2003-2026.
-
Article
O. Har-Shemesh, R. Quax, A. G. Hoekstra, and P. M. A. Sloot.
Information geometric analysis of phase transitions in complex patterns: the case of the Gray-Scott reaction-diffusion model.
Journal of Statistical Mechanics : Theory and Experiment
2016(4), 043301.
2014
-
Article
W. Duan, R. Quax, M. Lees, X. Qiu, and P. M. A. Sloot.
Topology dependent epidemic spreading velocity in weighted networks.
Journal of Statistical Mechanics : Theory and Experiment
2014(12), P12020.
-
Article
T. I. Jung, F. Vogiatzian, O. Har-Shemesh, C. P. Fitzsimons, and R. Quax.
Applying Information Theory to Neuronal Networks: From Theory to Experiments.
Entropy
16(11), pp. 5721-5737.
2013
-
Article
R. Quax, D. A. M. C. van de Vijver, D. Frentz, and P. M. A. Sloot.
Inferring epidemiological parameters from phylogenetic information for the HIV-1 epidemic among MSM.
The European Physical Journal - Special Topics
222(6), pp. 1347-1358.
-
Article
R. Quax, A. Apolloni, and P. M. A. Sloot.
The diminishing role of hubs in dynamical processes on complex networks.
Journal of the Royal Society Interface
10(88), 20130568.
-
Article
R. Quax, D. Kandhai, and P. M. A. Sloot.
Information dissipation as an early-warning signal for the Lehman Brothers collapse in financial time series.
Scientific Reports
3, 1898.
-
Article
R. Quax, A. Apolloni, and P. M. A. Sloot.
Towards understanding the behavior of physical systems using information theory.
The European Physical Journal - Special Topics
222(6), pp. 1389-1401.
-
PhD Thesis
2012
-
Article
R. Quax, A. Apolloni, and P. M. A. Sloot.
Information processing reveals how microscopic components affect the macroscopic system-state in complex networks.
Scientific Reports
.
-
Article
P. M. A. Sloot and R. Quax.
Information processing as a paradigm to model and simulate complex systems.
Journal of Computational Science
3(5), pp. 247-249.
2011
-
Article
A. Mei Shan, R. Quax, D. van de Vijver, Y. Zhu, and P. M. A. Sloot.
Increasing risk behaviour can outweigh the benefits of antiretroviral drug treatment on the HIV incidence among men-having-sex-with-men in Amsterdam.
BMC Infectious Diseases
11(118).
-
Article
R. Quax, D. A. Bader, and P. M. A. Sloot.
SEECN: simulating complex systems using dynamic complex networks.
International Journal for Multiscale Computational Engineering
9(2), pp. 201-214.
2010
-
Article
S. Mei, P. M. A. Sloot, R. Quax, Y. Zhu, and W. Wang.
Complex agent networks explaining the HIV epidemic among homosexual men in Amsterdam.
Mathematics and Computers in Simulation
80(5), pp. 1018-1030.
2009
-
Proceedings
R. Quax, D. A. Bader, and P. M. A. Sloot.
Simulating individual-based models of epidemics in hierarchical networks.
In:
Computational Science – ICCS 2009.
ISBN
9783642019708.
I, pp. 725-734.
2008
-
MSc Thesis
R. Quax.
Modeling and Simulating the Propagation of Infectious Diseases Using Complex Networks.
Supervised by
David Bader.
Publications of R. Quax