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2025
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Article
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Proceedings
Sacha Gijsbers, Valeria Krzhizhanovskaya, Stefano Trebeschi, and Vivek M. Sheraton.
A Computational Framework for Modelling Biomechanical Tumour Dynamics and Tissue Interactions: A Proof-of-Concept in Pleural Mesothelioma.
In:
Computational Science – ICCS 2025 Workshops.
ISBN
9783031975578.
II, pp. 83-97.
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Article
Selami Baglamis, Vivek M. Sheraton, Sanne M. van Neerven, Adrian Logiantara, Lisanne E. Nijman, Laura A. Hageman, Nicolas Léveillé, Clara C. Elbers, Maarten F. Bijlsma, Louis Vermeulen, Przemek M. Krawczyk, and Kristiaan J. Lenos.
Clonal dispersal is associated with tumor heterogeneity and poor prognosis in colorectal cancer.
iScience
28(5), 112403.
2024
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Article
M. Dorst, N. Zeevenhooven, R. Wilding, D. Mende, B. W. Brandt, E. Zaura, A. Hoekstra, and V. M. Sheraton.
FAIR compliant database development for human microbiome data samples.
Frontiers in Cellular and Infection Microbiology
14, 1384809.
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Article
H. I. Korkmaz, V. M. Sheraton, R. V. Bumbuc, M. Li, A. Pijpe, P. P. G. Mulder, B. K. H. L. Boekema, E. de Jong, S. G. F. Papendorp, R. Brands, E. Middelkoop, P. M. A. Sloot, and P. P. M. van Zuijlen.
An in silico modeling approach to understanding the dynamics of the post-burn immune response.
Frontiers in Immunology
15, 1303776.
2023
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Article
V. Yildirim, V. M. Sheraton, R. Brands, L. Crielaard, R. Quax, N. A. W. van Riel, K. Stronks, M. Nicolaou, and P. M. A. Sloot.
A data-driven computational model for obesity-driven diabetes onset and remission through weight loss.
iScience
26(11), 108324.
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Proceedings
Selami Baglamis, Joyaditya Saha, Maartje van der Heijden, Dani Ë. L. M. Miedema, D. É. Mi. van Gent, Przemek M. Krawczyk, Louis Vermeulen, and Vivek M. Sheraton.
A Novel High-Throughput Framework to Quantify Spatio-Temporal Tumor Clonal Dynamics.
In:
Computational Science – ICCS 2023.
ISBN
9783031360237.
III, pp. 345-359.
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Article
Haibin Qian, Selami Baglamis, Fumei Redeker, Julia Raaijman, Ron A. Hoebe, Vivek M. Sheraton, Louis Vermeulen, and Przemek M. Krawczyk.
High-Content and High-Throughput Clonogenic Survival Assay Using Fluorescence Barcoding.
Cancers
15(19), 4772.
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Proceedings
Roland V. Bumbuc, Vehpi Yildirim, and M. Vivek Sheraton.
Modelling the Interplay Between Chronic Stress and Type 2 Diabetes On-Set.
In:
Computational Science – ICCS 2023.
ISBN
9783031360206.
II, pp. 330-338.
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Article
Selami Baglamis, Vivek M. Sheraton, Debora Meijer, Haibin Qian, Ron A. Hoebe, Kristiaan J. Lenos, Max A. Betjes, Sander Tans, Jeroen van Zon, Louis Vermeulen, and Przemek M. Krawczyk.
Using picoliter droplet deposition to track clonal competition in adherent and organoid cancer cell cultures.
Scientific Reports
13, 18832.
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Proceedings
Roland V. Bumbuc, H. Ibrahim Korkmaz, P. P. M. Van Zuijlen, Louis Vermeulen, and Vivek M. Sheraton.
Understanding the Dynamics of the Proliferative Phase in Local Burn Wound Healing.
In:
Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023.
ISBN
9798350337488.
pp. 3676-3683.
2022
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Article
H. I. Korkmaz, F. B. Niessen, A. Pijpe, V. M. Sheraton, F. J. Vermolen, P. A. J. Krijnen, H. W. M. Niessen, P. M. A. Sloot, E. Middelkoop, S. Gibbs, and P. P. M. van Zuijlen.
Scar formation from the perspective of complexity science.
Journal of Wound Care
31(2), pp. 178-184.
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Article
P. P. M. van Zuijlen, H. I. K. Korkmaz, V. M. Sheraton, T. M. Haanstra, A. Pijpe, A. de Vries, C. H. van der Vlies, E. Bosma, E. de Jong, E. Middelkoop, F. J. Vermolen, and P. M. A. Sloot.
The Future of Burn Care From a Complexity Science Perspective.
Journal of Burn Care & Research
43(6), pp. 1312-1321.
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Proceedings
Vivek M. Sheraton and Shijun Ma.
Exploring Ductal Carcinoma In-Situ to Invasive Ductal Carcinoma Transitions Using Energy Minimization Principles.
In:
Computational Science - ICCS 2022.
ISBN
9783031087509.
I, pp. 375-388.
2021
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Article
S. C. Lodestijn, T. van den Bosch, L. E. Nijman, L. F. Moreno, S. Schlingemann, V. M. Sheraton, S. M. van Neerven, J. J. Koning, F. A. Vieira Braga, N. J. Paauw, M. C. Lecca, K. J. Lenos, E. Morissey, D. M. Miedema, D. J. Winton, M. F. Bijlsma, and L. Vermeulen.
Continuous clonal labeling reveals uniform progenitor potential in the adult exocrine pancreas.
Cell Stem Cell
28(11), pp. 2009-2019.e4.
2020
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Article
C. H. Tan, H.-S. Oh, V. M. Sheraton, E. Mancini, S. C. J. Loo, S. Kjelleberg, P. M. A. Sloot, and S. A. Rice.
Convection and the Extracellular Matrix Dictate Inter- and Intra-Biofilm Quorum Sensing Communication in Environmental Systems.
Environmental Science and Technology
54(11), p. 6730–6740.
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Article
M. V. Sheraton, G. G. Y. Chiew, V. Melnikov, E. Y. Tan, K. Q. Luo, N. Verma, and P. M. A. Sloot.
Emergence of spatio-temporal variations in chemotherapeutic drug efficacy.
BMC Cancer
20, 1201.
2019
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PhD Thesis
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Article
M. V. Sheraton, V. R. Melnikov, and P. M. A. Sloot.
Prediction and quantification of bacterial biofilm detachment using Glazier-Graner–Hogeweg method based model simulations.
Journal of Theoretical Biology
482, 109994.
2018
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Article
M. V. Sheraton, J. K. H. Yam, C. H. Tan, H. S. Oh, E. Mancini, L. Yang, S. A. Rice, and P. M. A. Sloot.
Mesoscopic Energy Minimization Drives Pseudomonas aeruginosa Biofilm Morphologies and Consequent Stratification of Antibiotic Activity Based on Cell Metabolism.
Antimicrobial Agents and Chemotherapy
62(5), e02544-17.
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Proceedings
M. V. Sheraton and P. M. A. Sloot.
Parallel performance analysis of bacterial biofilm simulation models.
In:
Computational Science – ICCS 2018.
ISBN
9783319936987.
I, pp. 496-505.
Publications of Vivek Sheraton Muniraj