Publications of the CSL group

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2025

• Proceedings
  J. Nevin, P. Zhang, D. Dimitrov, M. Lees, P. Groth, and S. Dietze. Understanding the Impact of Entity Linking on the Topology of Entity Co-occurrence Networks for Social Media Analysis. In: Knowledge Engineering and Knowledge Management. ISBN 9783031777929. p. 69–85.
  Abstract Citation Links
• Proceedings
  Valeria Epelbaum, Sophie Engels, Rory O’Connor, Denny Borsboom, Derek De Beurs, and Valeria Krzhizhanovskaya. Uncertainties in Modeling Psychological Symptom Networks. In: Computational Science – ICCS 2025 Workshops. ISBN 9783031975738. VI, pp. 140-153.
  Abstract Citation Links
• Article
  Alex Gabel, Rick Quax, and Efstratios Gavves. Type-II neural symmetry detection with Lie theory. Scientific Reports 15, 33500.
  Abstract Citation Links
• Article
  Arja O. Rydin, Yuri Milaneschi, Femke Lamers, Rick Quax, Noah van de Bunt, Angela Koloi, Bennard Doornbos, and Brenda W. J. H. Penninx. Trajectories of depressive symptoms, metabolic syndrome, inflammation, and cardiometabolic diseases. Brain, behavior, and immunity 130, 106120.
  Abstract Citation Links
• Article
  Niksa Mohammadi Bagheri, Gabor Závodszky, and Alfons G. Hoekstra. The impact of clot permeability on platelet fluxes toward its surface. PLoS ONE 20(3), e0317828.
  Abstract Citation Links
• Article
  A. Tabi, E. Pereira Santos, G. Brejao, and T. Siqueira. The ecological memory of landscape complexity shapes diversity of freshwater communities. Oikos 2025(10), e11253.
  Abstract Citation Links
• Article
  A. Pérez de Alba Ortíz and B. Ensing. Simultaneous sampling of multiple transition channels using adaptive paths of collective variables. Journal of Chemical Physics 163(14), 144104.
  Abstract Citation Links
• Article
  Theresa W. Ong, Lisa C. McManus, Vítor V. Vasconcelos, Luojun Yang, and Chenyang Su. Seeing Halos. American Naturalist 205(6), pp. 590-603.
  Abstract Citation Links
• Proceedings
  Vidit Kundu, Debraj Roy, Michel Ehrenhard, and Karin Pfeffer. Scaling Dynamics of the Electricity Utility Sector: Assessing the Role of Agglomeration Externalities and Sensitivity to Population Cutoffs in Spatial Dynamics Across European Regions. In: International Conference on Computational Science. pp. 345-352.
  Citation Links
• Article
  S. Hadjisotiriou, T. H. Oreel, V. A. W. J. Marchau, H. P. L. M. Korzilius, J. Coenen, V. Nespeca, E. A. J. A. Rouwette, V. V. Vasconcelos, R. Quax, H. F. L. Wertheim, and M. G. M. Olde Rikkert. Pandemic Performance Measures of Resilience for Healthcare and Education in the Netherlands. The International Journal of Health Planning and Management 40(5), pp. 1106-1121.
  Abstract Citation Links
• Article
  Koen van der Zwet, Ana I. Barros, Tom M. van Engers, and Peter M. A. Sloot. Opportunistic Organization of Illicit Supply Chains. Journal of Quantitative Criminology .
  Abstract Citation Links
• Article
  Marcel G. M. Olde Rikkert, Etiënne Rouwette, Hubert Korzilius, Tom Oreel, Rick Quax, Vincent Marchau, and Heiman Wertheim. Omgaan met onzekerheden ten tijde van een pandemie. Nederlands Tijdschrift voor Geneeskunde 169(2), D8287.
  Abstract Citation Links
• Chapter
  R. Quax, P. M. A. Sloot, and Mile Gu. Natural Information Processing. In: Foundational Papers in Complexity Science. 4, p. 2447.
  Abstract Citation Links
• Article
  Angela Koloi, Arja Rydin, Yuri Milaneschi, Femke Lamers, Jos A. Bosch, Emma Pruin, Sander W. van der Laan, Pashupati P. Mishra, Terho Lehtimäki, Mika Kähönen, Olli T. Raitakari, Dimitrios I. Fotiadis, and Rick Quax. Morbidity-bridging metabolic pathways. European Heart Journal Open 5(3), oeaf038.
  Abstract Citation Links
• Article
  X. Fu, V. Krzhizhanovskaya, A. Yakovlev, and S. Kovalchuk. Modelling diversity in hospital strategies in city-scale ambulance dispatching with coupled game-theoretic model and discrete-event simulation. Journal of Biomedical Informatics 162, 104777.
  Abstract Citation Links
• Article
  T. H. Oreel, S. Hadjisotiriou, V. V. Vasconcelos, V. A. W. J. Marchau, E. A. J. A. Rouwette, R. Quax, V. Nespeca, J. Coenen, H. P. L. M. Korzilius, H. Wertheim, and M. G. M. Olde Rikkert. Measuring Health System Resilience During the COVID-19 Pandemic Using Dynamic Indicators of Resilience Based on Sick-Leave Data. Health Science Reports 8(6), e70789.
  Abstract Citation Links
• Article
  N. Schrama, A. R. Tilman, and Vítor V. Vasconcelos. Majority illusion drives the spontaneous emergence of alternative states in common-pool resource games with network-based information. iScience 28(7), 112831.
  Abstract Citation Links
• Article
  C. Wang, A. Pérez de Alba Ortíz, and M. Dijkstra. Inverse Design Method with Enhanced Sampling for Complex Open Crystals. ACS Nano 19(18), pp. 17423-17437.
  Abstract Citation Links
• Article
  Jesse Boot, Maarten W J van den Ende, Reinout W Wiers, Mike H Lees, and Han L J van der Maas. Integrating dual-process decision making and social dynamics. Psychological Review .
  Abstract Citation Links
• Article
  M. Maglicic and V. V. Vasconcelos. Income inequality in the uptake of environmentally friendly products. iScience 28(4), 112277.
  Abstract Citation Links
• Article
  A. Koloi, N. P. R. Siregar, R. Quax, A. I. Sakellarios, F. Lamers, A. Rydin, K. Dobretz, C. Papaloukas, D. I. Fotiadis, and J. A. Bosch. Immunometabolic Pathways. Biological Psychiatry: Global Open Science 5(5), 100528.
  Abstract Citation Links
• Article
  S. Hadjisotiriou, J. Coenen, E. A. J. A. Rouwette, V. Nespeca, T. H. Oreel, V. A. W. J. Marchau, V. V. Vasconcelos, R. Quax, H. F. L. Wertheim, M. G. M. Olde Rikkert, and H. P. L. M. Korzilius. Identifying key complex relations between education and healthcare in the Netherlands for future pandemic management. Health research policy and systems 23, 89.
  Abstract Citation Links
• PhD Thesis
  C. van Elteren. How to intervene?. Supervised by P. M. A. Sloot, M. H. Lees, and V. V. Vasconcelos.
  Abstract Citation
• Article
  B. D. L. Châtel, R. Quax, G. Peeters, R. Corten, M. G. M. Olde Rikkert, and V. V. Vasconcelos. Homophily and social influence as mechanisms of loneliness clustering in social networks. Scientific Reports 15, 15576.
  Abstract Citation Links
• Article
  F. L. Pinheiro and V. V. Vasconcelos. Heterogeneous update processes shape information cascades in social networks. Scientific Reports 15, 13999.
  Abstract Citation Links
• Proceedings
  Sophie Engels, Valeria Epelbaum, Shirley B. Wang, Derek de Beurs, and Valeria Krzhizhanovskaya. Global Sensitivity Analysis for a Mathematical Model of the General Escape Theory of Suicide. In: Computational Science – ICCS 2025 Workshops. ISBN 9783031975738. VI, pp. 183-197.
  Abstract Citation Links
• Article
  Z. M. C. van Berlo, R. G. Belleman, Joey van der Kaaij, M. H. C. Meijers, B. A. Lehmann, and A. T. S. Gielen. From tangibility to proximity. Environmental Communication .
  Citation Links
• Article
  Ioannis Papapanagiotou, Roland V. Bumbuc, H. Ibrahim Korkmaz, Valeria Krzhizhanovskaya, and Vivek M. Sheraton. From simulations to surrogates. Journal of Computational Science 89, 102593.
  Abstract Citation Links
• Report
  G. F. Laerkholm, J. Dhar, B. Havelkova, A. Job, U. Pidun, M. Reeves, S. A. Levin, and V. V. Vasconcelos. From Change Management to Change Strategy.
  Citation Links
• Proceedings
  Isaak Mengesha and Debraj Roy. Evolutionary Game Selection Leads to Emergent Inequality. In: International Conference on Computational Science. pp. 284-297.
  Citation
• Article
  L. Luo, K. Bochenina, T. M. Abuhay, N. Dorzhu, G. Kampis, S. Kovalchuk, V. Krzhizhanovskaya, M. Paszynski, C. de Mulatier, J. Dongarra, and P. M. A. Sloot. Evolution of the computational science community. Journal of Computational Science 89, 102609.
  Abstract Citation Links
• Article
  Charles Dupont and Debraj Roy. Emergent poverty traps at multiple levels impede social mobility. Humanities and Social Sciences Communications 12(1).
  Abstract Citation Links
• Article
  R. W. Wiers, H. El Marroun, C. Bockting, H. Krugers, H. Bozhar, J. Dalege, B. De Mooij, A. Finnemann, R. Freichel, A. Korosi, H. Larsen, M. Lees, P. Leijten, P. J. Lucassen, P. Mc'Kearny, G. Overbeek, S. R. de Rooij, E. Smit, R. Van der Veen, R. van Holst, and I. Veer. Debate: Urban versus rural environments – which is better for mental health? The one good thing about a small town…. Child and Adolescent Mental Health 30(2), pp. 189-191.
  Abstract Citation Links
• Article
  Sergey V. Kovalchuk, Clélia de Mulatier, Valeria V. Krzhizhanovskaya, Leonardo Franco, Maciej Paszyński, Jack Dongarra, and Peter M. A. Sloot. Computational science. Journal of Computational Science .
  Citation Links
• PhD Thesis
  E. P. N. Dignum. Computational modelling of school choice and school segregation. ISBN 9789464737264. Supervised by P. M. A. Sloot, A. Flache, M. H. Lees, and W. R. Boterman.
  Abstract Citation
• Article
  S. Baglamis, V. M. Sheraton, S. M. van Neerven, A. Logiantara, L. E. Nijman, L. A. Hageman, N. Léveillé, C. C. Elbers, M. F. Bijlsma, L. Vermeulen, P. M. Krawczyk, and K. J. Lenos. Clonal dispersal is associated with tumor heterogeneity and poor prognosis in colorectal cancer. iScience 28(5), 112403.
  Abstract Citation Links
• Article
  Isaak Mengesha and Debraj Roy. Carbon pricing drives critical transition to green growth. Nature Communications 16(1), p. 1321.
  Citation Links
• Article
  G. Karanasiou, E. Edelman, F.-H. Boissel, R. Byrne, L. Emili, M. Fawdry, N. Filipović, D. Flynn, L. Geris, A. Hoekstra, M. C. Jori, A. Kiapour, D. Krsmanovic, T. Marchal, F. Musuamba, F. Pappalardo, L. Petrini, M. Reiterer, M. Viceconti, K. Zeier, L. K. Michalis, and D. I. Fotiadis. Advancing In Silico Clinical Trials for Regulatory Adoption and Innovation. IEEE Journal of Biomedical and Health Informatics 29(4), pp. 2654-2668.
  Abstract Citation Links
• Article
  J. Li, J. A. Bosch, A. O. Rydin, C. Hourican, A. Koloi, S. Tassi, P. P. Mishra, B. H. Mishra, M. Kähönen, T. Lehtimäki, O. T. Raitakari, R. Laaksonen, L. Keltikangas-Järvinen, M. Juonala, and R. Quax. A multilayer network analysis of cardiovascular-depression comorbidity reveals symptom-specific molecular biomarkers. Psychological Medicine 55, e316.
  Abstract Citation Links
• Article
  Emanuele Mezzi, Frederike Oetker, Paul Duijn, and Rick Quax. A methodology to infer value networks from police case files. Crime Science 14, 8.
  Abstract Citation Links
• Proceedings
  S. Gijsbers, V. Krzhizhanovskaya, S. Trebeschi, and V. M. Sheraton. A Computational Framework for Modelling Biomechanical Tumour Dynamics and Tissue Interactions: A Proof-of-Concept in Pleural Mesothelioma. In: Computational Science – ICCS 2025 Workshops. ISBN 9783031975578. II, pp. 83-97.
  Abstract Citation Links

2024

• Article
  S. C. Y. Lo, J. W. S. McCullough, X. Xue, and P. V. Coveney. Uncertainty quantification of the impact of peripheral arterial disease on abdominal aortic aneurysms in blood flow simulations. Journal of the Royal Society Interface 21(213), 20230656.
  Abstract Citation Links
• Proceedings
  L. Luo, S. Kovalchuk, V. Krzhizhanovskaya, M. Paszynski, C. de Mulatier, J. Dongarra, and P. M. A. Sloot. Trends in Computational Science. In: Computational Science – ICCS 2024. ISBN 9783031637513. II, pp. 19-33.
  Abstract Citation Links
• Article
  V. Bazyleva, Victoria M. Garibay, and D. Roy. Trajectory-based global sensitivity analysis in multiscale models. Scientific Reports 14, 13902.
  Abstract Citation Links
• Proceedings
  A. G. Hoekstra and H. Marquering. Towards a Generation of Digital Twins in Healthcare of Ischaemic and Haemorrhagic Stroke. In: Computational Science – ICCS 2024. ISBN 9783031637599. III, pp. 239-245.
  Abstract Citation Links
• Article
  C. van Elteren. Three Myths in Complexity Science and How to Resolve Them.
  Abstract Citation Links
• Article
  J. F. Uleman, R. Quax, R. J. F. Melis, A. G. Hoekstra, and M. G. M. Olde Rikkert. The need for systems thinking to advance Alzheimer's disease research. Psychiatry Research 333, 115741.
  Abstract Citation Links
• Article
  A. C. Pronk, L. Wang, E. P. van Poelgeest, M. M. G. Leeflang, J. G. Daams, A. G. Hoekstra, and N. van der Velde. The impact of cardiovascular diagnostics and treatments on fall risk in older adults. GeroScience 46, pp. 153-169.
  Abstract Citation Links
• Article
  Y. Hao, C. Tersteeg, A. G. Hoekstra, and G. Závodszky. The effect of flow-derived mechanical cues on the growth and morphology of platelet aggregates under low, medium, and high shear rates. Computers in Biology and Medicine 180, 109010.
  Abstract Citation Links
• Article
  Martin Friesen and Sven Karbach. Stationary covariance regime for affine stochastic covariance models in Hilbert spaces. Finance and Stochastics 28(4), p. 1077–1116.
  Citation Links
• Article
  Andrea Tabi, Tadeu Siqueira, and Jonathan D. Tonkin. Species interactions drive continuous assembly of freshwater communities in stochastic environments. Scientific Reports 14, 21747.
  Abstract Citation Links
• Article
  P. V. Coveney. Sharkovskii's theorem and the limits of digital computers for the simulation of chaotic dynamical systems. Journal of Computational Science 83, 102449.
  Abstract Citation Links
• Article
  Loes Crielaard, Jeroen F Uleman, Bas DL Châtel, Sacha Epskamp, Peter Sloot, and Rick Quax. Refining the causal loop diagram: A tutorial for maximizing the contribution of domain expertise in computational system dynamics modeling. Psychological Methods 29(1), pp. 169-201.
  Abstract Citation Links
• Proceedings
  Leonardo Franco, Clélia de Mulatier, Maciej Paszynski, Valeria V. Krzhizhanovskaya, Jack J. Dongarra, and Peter M. A. Sloot. Preface. In: 24th International Conference on Computational Science, ICCS 2024. pp. v-vi.
  Citation
• Proceedings
  Leonardo Franco, Clélia de Mulatier, Maciej Paszynski, Valeria V. Krzhizhanovskaya, Jack J. Dongarra, and Peter M. A. Sloot. Preface. In: 24th International Conference on Computational Science, ICCS 2024. pp. v-vi.
  Citation
• Proceedings
  Leonardo Franco, Clélia de Mulatier, Maciej Paszynski, Valeria V. Krzhizhanovskaya, Jack J. Dongarra, and Peter M. A. Sloot. Preface. In: 24th International Conference on Computational Science, ICCS 2024. pp. v-vi.
  Citation
• Proceedings
  Leonardo Franco, Clélia de Mulatier, Maciej Paszynski, Valeria V. Krzhizhanovskaya, Jack J. Dongarra, and Peter M. A. Sloot. Preface. In: 24th International Conference on Computational Science, ICCS 2024. pp. v-vi.
  Citation
• Proceedings
  Leonardo Franco, Clélia de Mulatier, Maciej Paszynski, Valeria V. Krzhizhanovskaya, Jack J. Dongarra, and Peter M. A. Sloot. Preface. In: 24th International Conference on Computational Science, ICCS 2024. pp. v-vi.
  Citation
• Proceedings
  Leonardo Franco, Clélia de Mulatier, Maciej Paszynski, Valeria V. Krzhizhanovskaya, Jack J. Dongarra, and Peter M. A. Sloot. Preface. In: 24th International Conference on Computational Science, ICCS 2024. pp. v-vi.
  Citation
• Proceedings
  Leonardo Franco, Clélia de Mulatier, Maciej Paszynski, Valeria V. Krzhizhanovskaya, Jack J. Dongarra, and Peter M. A. Sloot. Preface. In: 24th International Conference on Computational Science, ICCS 2024. pp. v-vi.
  Citation
• Article
  A. Koloi, V. S. Loukas, C. Hourican, A. I. Sakellarios, R. Quax, P. P. Mishra, T. Lehtimäki, O. T. Raitakari, C. Papaloukas, J. A. Bosch, W. März, and D. I. Fotiadis. Predicting early-stage coronary artery disease using machine learning and routine clinical biomarkers improved by augmented virtual data. European Heart Journal - Digital Health 5(5), pp. 542-550.
  Abstract Citation Links
• PhD Thesis
  C. J. Spieker. Platelet aggregation in complex vessel geometries. ISBN 9789464698121. Supervised by A. G. Hoekstra and G. Závodszky.
  Abstract Citation Links
• Proceedings
  Tika van Bennekum, Marie Colin, Valeria Krzhizhanovskaya, and Daniel Bonn. Plasma-Assisted Air Cleaning Decreases COVID-19 Infections in a Primary School. In: Computational Science – ICCS 2024 - 24th International Conference, Proceedings. ISBN 9783031637711. pp. 196-209.
  Abstract Citation Links
• Article
  X. Xue, S. Wang, H.-D. Yao, L. Davidson, and P. V. Coveney. Physics informed data-driven near-wall modelling for lattice Boltzmann simulation of high Reynolds number turbulent flows. Communications Physics 7, 338.
  Abstract Citation Links
• PhD Thesis
  J. H. Hoencamp. Modern advances in computational credit risk modelling. ISBN 9789464736298. Supervised by B. D. Kandhai and P. M. A. Sloot.
  Abstract Citation
• Article
  Aleksander Janczewski, Ioannis Anagnostou, and Drona Kandhai. Inferring Dealer Networks in the Foreign Exchange Market Using Conditional Transfer Entropy. Entropy 26(9), 738.
  Abstract Citation Links
• Article
  H. M. Borges, V. V. Vasconcelos, and F. L. Pinheiro. How social rewiring preferences bridge polarized communities. Chaos, Solitons and Fractals 180, 114594.
  Abstract Citation Links
• Proceedings
  Otto Kuusela and Debraj Roy. Higher Order Reasoning under Intent Uncertainty Reinforces the Hobbesian Trap. In: AAMAS '24. ISBN 9798400704864. p. 1066–1074.
  Abstract Citation Links
• Article
  W. Edeling, M. Vassaux, Y. Yang, S. Wan, S. Guillas, and P. V. Coveney. Global ranking of the sensitivity of interaction potential contributions within classical molecular dynamics force fields. npj Comput Mater 10, 87.
  Abstract Citation Links
• Chapter
  G. Závodszky, D. Gyürki, G. Károlyi, I. Szikora, and G. Paál. Fractals and Chaos in the Hemodynamics of Intracranial Aneurysms. In: The Fractal Geometry of the Brain. ISBN 9783031476068. p. 397–412.
  Abstract Citation Links
• Article
  M. Dorst, N. Zeevenhooven, R. Wilding, D. Mende, B. W. Brandt, E. Zaura, A. Hoekstra, and V. M. Sheraton. FAIR compliant database development for human microbiome data samples. Frontiers in Cellular and Infection Microbiology 14, 1384809.
  Abstract Citation Links
• Article
  C. Hourican, J. Li, P. P. Mishra, T. Lehtimäki, B. H. Mishra, M. Kähönen, O. T. Raitakari, R. Laaksonen, L. Keltikangas-Järvinen, M. Juonala, and R. Quax. Efficient Search Algorithms for Identifying Synergistic Associations in High-Dimensional Datasets. Entropy 26(11), 968.
  Abstract Citation Links
• Article
  M. W. J. van den Ende, M. Maijer, M. H. Lees, and H. L. J. van der Maas. Dynamics in and dynamics of networks using DyNSimF. Journal of Computational Science 81, 102376.
  Abstract Citation Links
• Article
  W. Hazeleger, J. P. M. Aerts, P. Bauer, M. F. P. Bierkens, G. Camps-Valls, M. M. Dekker, F. J. Doblas-Reyes, V. Eyring, C. Finkenauer, A. Grundner, S. Hachinger, D. M. Hall, T. Hartmann, F. Iglesias-Suarez, M. Janssens, E. R. Jones, T. Kölling, M. Lees, S. Lhermitte, R. V. van Nieuwpoort, A.-K. Pahker, O. J. Pellicer-Valero, F. P. Pijpers, A. Siibak, J. Spitzer, B. Stevens, V. V. Vasconcelos, and F. C. Vossepoel. Digital twins of the Earth with and for humans. Communications earth & environment 5, 463.
  Abstract Citation Links
• Article
  D. Ye, V. Krzhizhanovskaya, and A. G. Hoekstra. Data-driven reduced-order modelling for blood flow simulations with geometry-informed snapshots. Journal of computational Physics 497, 112639.
  Abstract Citation Links
• Article
  A. Gabel, R. Quax, and E. Gavves. Data-driven Lie point symmetry detection for continuous dynamical systems. Machine Learning: Science and Technology 5(1), 015037.
  Abstract Citation Links
• Article
  C. van Elteren, V. V. Vasconcelos, and M. Lees. Criminal organizations exhibit hysteresis, resilience, and robustness by balancing security and efficiency. Scientific Reports 14, 17678.
  Abstract Citation Links
• Proceedings
  F. Oetker, L. A. S. Roelofsen, R. G. Belleman, and R. Quax. CrimeSeen: An Interactive Visualization Environment for Scenario Testing on Criminal Cocaine Networks. In: Computational Science – ICCS 2024. ISBN 9783031637599. III, pp. 195-204.
  Abstract Citation Links
• Article
  W. Liao, V. V. Vasconcelos, S. A. Levin, and M. Oppenheimer. Cooperative food bank: a collective insurance regime to govern food insecurity and nitrogen pollution under risk. Environmental Research Letters 19(8), 084057.
  Abstract Citation Links
• Article
  Sergey V. Kovalchuk, Clélia de Mulatier, Valeria V. Krzhizhanovskaya, Jiří Mikyška, Maciej Paszyński, Jack Dongarra, and Peter M. A. Sloot. Computation at the Cutting Edge of Science. Journal of Computational Science 81, 102379.
  Citation Links
• Article
  B. Csippa, L. Sándor, G. Závodszky, I. Szikora, and G. Paál. Comparison of Flow Reduction Efficacy of Nominal and Oversized Flow Diverters Using a Novel Measurement-assisted in Silico Method. Clinical Neuroradiology 34(3), p. 675–684.
  Abstract Citation Links
• Article
  J. Kwak, M. H. Lees, and W. Cai. Characterizing pedestrian contact interaction trajectories to understand spreading risk in human crowds. Journal of Computational Science 81, 102358.
  Abstract Citation Links
• Chapter
  G. Zavodszky, C. Spieker, B. Czaja, and B. van Rooij. Cellular Blood Flow Modeling with HemoCell. In: High Performance Computing for Drug Discovery and Biomedicine . ISBN 9781071634493. pp. 351-368.
  Abstract Citation Links
• Article
  C. van Elteren, R. Quax, and P. M. A. Sloot. Cascades Towards Noise-Induced Transitions on Networks Revealed Using Information Flows. Entropy 26(12), 1050.
  Abstract Citation Links
• Article
  C. J. Spieker, A. Y. Kern, N. Korin, P. H. Mangin, A. G. Hoekstra, and G. Závodszky. Carotid single- and dual-layer stents reduce the wall adhesion of platelets by influencing flow and cellular transport. Computers in Biology and Medicine 183, 109313.
  Abstract Citation Links
• Article
  J. Gehlen, J. Li, C. Hourican, S. Tassi, P. P. Mishra, T. Lehtimäki, M. Kähönen, O. Raitakari, J. A. Bosch, and R. Quax. Bias in O-Information Estimation. Entropy 26(10), 837.
  Abstract Citation Links
• Article
  P. V. Coveney and Roger Highfield. Artificial Intelligence Must Be Made More Scientific. Journal of Chemical Information and Modeling 64(15), pp. 5739-5741.
  Abstract Citation Links
• Proceedings
  K. Ly, Y. Kashnitsky, S. Chamezopoulos, and V. Krzhizhanovskaya. Article Classification with Graph Neural Networks and Multigraphs. In: The 2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation (LREC-COLING 2024). ISBN 9782493814104. pp. 1539-1547.
  Abstract Citation Links
• Proceedings
  H. D. Ladera Villaplana, J. Kwak, M. H. Lees, H. Li, and W. Cai. Application of Generative Artificial Intelligence for Epidemic Modeling. In: 2024 Winter Simulation Conference (WSC 2024). ISBN 9798331534202. pp. 2727-2738.
  Abstract Citation Links
• Article
  D. Mittal, S. M. Constantino, and V. V. Vasconcelos. Anti-conformists catalyze societal transitions and facilitate the expression of evolving preferences. PNAS nexus 3(8), pgae302.
  Abstract Citation Links
• Article
  H. I. Korkmaz, V. M. Sheraton, R. V. Bumbuc, M. Li, A. Pijpe, P. P. G. Mulder, B. K. H. L. Boekema, E. de Jong, S. G. F. Papendorp, R. Brands, E. Middelkoop, P. M. A. Sloot, and P. P. M. van Zuijlen. An in silico modeling approach to understanding the dynamics of the post-burn immune response. Frontiers in Immunology 15, 1303776.
  Abstract Citation Links
• Article
  M. W. J. van den Ende, H. L. J. van der Maas, S. Epskamp, and M. H. Lees. Alcohol consumption as a socially contagious phenomenon in the Framingham Heart Study social network. Scientific Reports 14, 4499.
  Abstract Citation Links
• Article
  S. Terpstra, F. M. Darcie Marquitti, and V. V. Vasconcelos. Adaptive foraging of pollinators fosters gradual tipping under resource competition and rapid environmental change. PLoS Computational Biology 20, e1011762.
  Abstract Citation Links
• Article
  J. H. Hoencamp, S. Jain, and B. D. Kandhai. A static replication approach for callable interest rate derivatives: mathematical foundations and efficient estimation of SIMM–MVA. Quantitative Finance 24(3-4), pp. 409-432.
  Citation Links
• Article
  E. Dignum, W. Boterman, A. Flache, and M. Lees. A data-driven agent-based model of primary school segregation in Amsterdam. Journal of Mathematical Sociology 48(3), pp. 362-392.
  Abstract Citation Links
• Proceedings
  Y. Hao, A. G. Hoekstra, and G. Závodszky. A Three-Dimensional Fluid-Structure Interaction Model for Platelet Aggregates Based on Porosity-Dependent Neo-Hookean Material. In: Computational Science – ICCS 2024. ISBN 9783031637834. VII, pp. 48-62.
  Abstract Citation Links
• Proceedings
  O. Ranum, G. Otterspeer, J. I. Andersen, R. G. Belleman, and F. Roelofsen. 3D-LEX v1.0. In: 11th Workshop on the Representation and Processing of Sign Languages: Evaluation of Sign Language Resources (sign-lang@LREC-COLING 2024). ISBN 9782493814302. pp. 290-301.
  Abstract Citation Links

2023

• Article
  Selami Baglamis, Vivek M. Sheraton, Debora Meijer, Haibin Qian, Ron A. Hoebe, Kristiaan J. Lenos, Max A. Betjes, Sander Tans, Jeroen van Zon, Louis Vermeulen, and Przemek M. Krawczyk. Using picoliter droplet deposition to track clonal competition in adherent and organoid cancer cell cultures. Scientific Reports 13, 18832.
  Abstract Citation Links
• Article
  L. Crielaard, R. Quax, A. D. M. Sawyer, V. V. Vasconcelos, M. Nicolaou, K. Stronks, and P. M. A. Sloot. Using network analysis to identify leverage points based on causal loop diagrams leads to false inference. Scientific Reports 13(1), 21046.
  Abstract Citation Links
• Article
  A. Ralli, T. Weaving, A. Tranter, W. M. Kirby, P. J. Love, and P. V. Coveney. Unitary partitioning and the contextual subspace variational quantum eigensolver. Physical Review Research 5(1), 013095.
  Abstract Citation Links

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