Publications of the CSL group

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2021

• Article
  Tristan Bereau. Inserting Small Molecules Across Membrane Mixtures: Insight from the Potential of Mean Force. Biophysical Journal 120(3, Supplement 1), p. 10A.
  Citation Links
• Proceedings
  A. W. Abcouwer, Emoke Takács, and Csilla Rácz. Innovating Management and Leadership in Contemporary Times: Motivation and Evaluation in Learning. In: Proceedings of the 17th European Conference on Management, Leadership and Governance. ISBN 9781914587214. pp. 1-11.
  Abstract Citation
• Article
  P. Dutta, R. Quax, L. Crielaard, L. Badiali, and P. M. A. Sloot. Inferring temporal dynamics from cross-sectional data using Langevin dynamics. Royal Society Open Science 8(11), 211374.
  Abstract Citation Links
• Article
  C. Miller, R. M. Padmos, M. van der Kolk, T. I. Józsa, N. Samuels, Y. Xue, S. J. Payne, and A. G. Hoekstra. In silico trials for treatment of acute ischemic stroke: Design and implementation. Computers in Biology and Medicine 137, 104802.
  Abstract Citation Links
• Article
  I. C. A. Scherpbier, M. E. Abrahamse, R. G. Belleman, A. Popma, and R. J. L. Lindauer. Implementation of Virtual Reality to Parent-Child Interaction Therapy for Enhancement of Positive Parenting Skills: The Study Protocol for Single-Case Experimental Design with Multiple Baselines.
  Abstract Citation Links
• Proceedings
  Youssef Assal, Emoke Takacs, and A. W. Abcouwer. INFORMATION OR COMPLICATION?. In: 37th EBES Conference Proceedings. 37-II, pp. 1249-1261.
  Abstract Citation
• Article
  J. W. S. McCullough and P. V. Coveney. High fidelity blood flow in a patient-specific arteriovenous fistula. Scientific Reports 11, 22301.
  Abstract Citation Links
• Article
  B. J. M. van Rooij, G. Závodszky, A. G. Hoekstra, and D. N. Ku. Haemodynamic flow conditions at the initiation of high-shear platelet aggregation: a combined in vitro and cellular in silico study. Interface Focus 11(1), 20190126.
  Abstract Citation Links
• Article
  C. E. S. Mattsson, F. W. Takes, E. M. Heemskerk, C. Diks, G. Buiten, A. Faber, and P. M. A. Sloot. Functional Structure in Production Networks. Frontiers in Big Data 4, 666712.
  Abstract Citation Links
• Article
  M. Girard and T. Bereau. Finite-size transitions in complex membranes. Biophysical Journal 120(12), pp. 2436-2443.
  Abstract Citation Links
• Article
  T. Abcouwer, E. Takács, and J. Solymosy. Fine-tuning the Evaluation Focus in the University Cooperative Learning Model in Relation to the Pandemic. Communications of the Association for Information Systems 48, 25.
  Abstract Citation Links
• Article
  E. Weinans, R. Quax, E. H. van Nes, and I. A. van de Leemput. Evaluating the performance of multivariate indicators of resilience loss. Scientific Reports 11, 9148.
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• Article
  J. Kwak, M. H. Lees, W. Cai, A. R. Pourghaderi, and M. E. H. Ong. Estimating horizontal movement performance of patient beds and the impact on emergency evacuation time. Safety Science 134, 105038.
  Abstract Citation Links
• Article
  V. Karbovskii, M. Lees, A. Presbitero, A. Kurilkin, D. Voloshin, I. Derevitskii, A. Karsakov, and P. M. A. Sloot. Ensemble learning for large-scale crowd flow prediction. Engineering Applications of Artificial Intelligence 106, 104469.
  Abstract Citation Links
• Article
  P. Zun, A. Svitenkov, and A. Hoekstra. Effects of local coronary blood flow dynamics on the predictions of a model of in-stent restenosis. Journal of Biomechanics 120, 110361.
  Abstract Citation Links
• Proceedings
  T. Schilstra, E. Takács, and T. Abcouwer. Ecosystem Approach to life-long learning. In: Proceedings of the 2021 SIGED International Conference on Information Systems Education and Research. ISBN 9781734312324.
  Abstract Citation Links
• Article
  J. F. Rudzinski, S. Kloth, S. Wörner, T. Pal, K. Kremer, T. Bereau, and M. Vogel. Dynamical properties across different coarse-grained models for ionic liquids. Journal of Physics-Condensed Matter 33(22), 224001.
  Abstract Citation Links
• Proceedings
  D. Knol, F. de Leeuw, J. F. Meirink, and V. V. Krzhizhanovskaya. Deep Learning for Solar Irradiance Nowcasting: A Comparison of a Recurrent Neural Network and Two Traditional Methods. In: Computational Science – ICCS 2021. ISBN 9783030779771. V, pp. 309-322.
  Abstract Citation Links
• Article
  A. Dutta, J. Vreeken, L. M. Ghiringhelli, and T. Bereau. Data-driven equation for drug-membrane permeability across drugs and membranes. Journal of Chemical Physics 154(24), 244114.
  Abstract Citation Links
• Article
  R. M. Padmos, T. I. Józsa, W. K. El-Bouri, P. R. Konduri, S. J. Payne, and A. G. Hoekstra. Coupling one-dimensional arterial blood flow to three-dimensional tissue perfusion models for in silico trials of acute ischaemic stroke. Interface Focus 11(1), 20190125.
  Abstract Citation Links
• Article
  S. C. Lodestijn, T. van den Bosch, L. E. Nijman, L. F. Moreno, S. Schlingemann, V. M. Sheraton, S. M. van Neerven, J. J. Koning, F. A. Vieira Braga, N. J. Paauw, M. C. Lecca, K. J. Lenos, E. Morissey, D. M. Miedema, D. J. Winton, M. F. Bijlsma, and L. Vermeulen. Continuous clonal labeling reveals uniform progenitor potential in the adult exocrine pancreas. Cell Stem Cell 28(11), pp. 2009-2019.e4.
  Abstract Citation Links
• Article
  M. Girard and T. Bereau. Computer simulations of lipid regulation by molecular semigrand canonical ensembles. Biophysical Journal 120(12), pp. 2370-2373.
  Abstract Citation Links
• PhD Thesis
  V. Melnikov. Computational models of human response to urban heat. Supervised by P. M. A. Sloot, V. Krzhizhanovskaya, and M. H. Lees.
  Abstract Citation Links
• Article
  T. Bereau. Computational compound screening of biomolecules and soft materials by molecular simulations. Modelling and Simulation in Materials Science and Engineering 29(2), 023001.
  Abstract Citation Links
• Article
  P. V. Coveney, A. Hoekstra, B. Rodriguez, and M. Viceconti. Computational biomedicine. Part II. Interface Focus 11(1), 20200082.
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• Article
  W. Sun, L. Liu, X. Chen, A. Szolnoki, and V. V. Vasconcelos. Combination of institutional incentives for cooperative governance of risky commons. iScience 24(8), 102844.
  Abstract Citation Links
• Article
  V. Vasconcelos and F. Santos. Biased perceptions explain collective action deadlocks and suggest new mechanisms to prompt cooperation. Authors Vítor Vasconcelos and Fernando Santos on the article. IAS Review 2, 2.2.
  Citation Links
• Article
  F. P. Santos, S. A. Levin, and V. V. Vasconcelos. Biased perceptions explain collective action deadlocks and suggest new mechanisms to prompt cooperation. iScience 24(4), 102375.
  Abstract Citation Links
• Article
  Yasemin Bozkurt Varolgunes, Tristan Bereau, and Joseph F. Rudzinski. Automated Identification of Collective Variables and Metastable States from Molecular Dynamics Data. Biophysical Journal 120(3, Supplement 1), p. 79A.
  Citation
• Article
  G. Luraghi, S. Bridio, C. Miller, A. Hoekstra, J. F. Rodriguez Matas, and F. Migliavacca. Applicability analysis to evaluate credibility of an in silico thrombectomy procedure. Journal of Biomechanics 126, 110631.
  Abstract Citation Links
• Article
  J. F. Uleman, R. Quax, R. J. F. Melis, A. Hoekstra, and M. G. M. Olde Rikkert. An individualized systems model to optimize Alzheimer’s disease prevention strategies. Alzheimer's & Dementia 17(S10), e050885.
  Abstract Citation Links
• Article
  J. W. S. McCullough and P. V. Coveney. An efficient, localised approach for the simulation of elastic blood vessels using the lattice Boltzmann method. Scientific Reports 11, 24260.
  Abstract Citation Links
• Article
  S. Ghaffarian, D. Roy, T. Filatova, and N. Kerle. Agent-based modelling of post-disaster recovery with remote sensing data. International Journal of Disaster Risk Reduction .
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• Article
  M. Stieffenhofer, T. Bereau, and M. Wand. Adversarial reverse mapping of condensed-phase molecular structures: Chemical transferability. APL Materials 9(3), 031107.
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• Article
  J. van der Wal, C. D. van Borkulo, M. K. Deserno, J. J. F. Breedvelt, M. Lees, J. C. Lokman, D. Borsboom, D. Denys, R. J. van Holst, M. P. Smidt, K. Stronks, P. J. Lucassen, J. C. M. van Weert, P. M. A. Sloot, C. L. Bockting, and R. W. Wiers. Advancing urban mental health research: from complexity science to actionable targets for intervention. The Lancet. Psychiatry 8(11), pp. 991-1000.
  Abstract Citation Links
• Article
  V. A. Karatayev, V. V. Vasconcelos, A.-S. Lafuite, S. A. Levin, C. T. Bauch, and M. Anand. A well-timed shift from local to global agreements accelerates climate change mitigation. Nature Communications 12, 2908.
  Abstract Citation Links
• Article
  A. Presbitero, V. R. Melnikov, V. V. Krzhizhanovskaya, and P. M. A. Sloot. A unifying model to estimate the effect of heat stress in the human innate immunity during physical activities. Scientific Reports 11, 16688.
  Abstract Citation Links
• Proceedings
  Khalid Azougagh, Jesse van den Berge, and R. G. Belleman. A prototype for the treatment of children with selective mutism using interactive 360° VR. In: EuroXR 2021: Proceedings of the Virtual EuroXR Conference. ISBN 978-951-38-8756-8. pp. 37-43.
  Abstract Citation Links
• Article
  T. I. Józsa, R. M. Padmos, N. Samuels, W. K. El-Bouri, A. G. Hoekstra, and S. J. Payne. A porous circulation model of the human brain for in silico clinical trials in ischaemic stroke. Interface Focus 11(1), 20190127.
  Abstract Citation Links
• Proceedings
  B. Su, J. Kwak, A. R. Pourghaderi, M. H. Lees, K. B. K. Tan, S. Y. Loo, I. S. Y. Chua, J. L. J. Quah, W. Cai, and M. E. H. Ong. A Model-based Analysis of Evacuation Strategies in Hospital Emergency Departments. In: 2021 Winter Simulation Conference (WSC 2021). ISBN 9781665433112. pp. 1583-1594.
  Abstract Citation Links
• Article
  S. V. Kovalchuk, V. V. Krzhizhanovskaya, M. Paszyński, G. Závodszky, M. H. Lees, J. Dongarra, and P. M. A. Sloot. 20 years of computational science: Selected papers from 2020 International Conference on Computational Science. Journal of Computational Science 53, 101395.
  Citation Links

2020

• Article
  D. Roy and M. Lees. Understanding resilience in slums using an agent-based model. Computers, Environment and Urban Systems 80, 101458.
  Abstract Citation Links
• Article
  J. Uleman, R. J. F. Melis, A. Hoekstra, R. Quax, and M. G. M. Olde Rikkert. Uncovering the multicausality of Alzheimer’s disease: A systems modeling approach. Alzheimer's & Dementia 16(S10), e041105.
  Abstract Citation Links
• PhD Thesis
  A. Nikishova. Uncertainty quantification of multiscale models. ISBN 9789402819182. Supervised by A. G. Hoekstra and P. V. Coveney.
  Abstract Citation Links
• Article
  A. Taberna, T. Filatova, D. Roy, and B. Noll. Tracing resilience, social dynamics and behavioral change: a review of agent-based flood risk models. Socio-Environmental Systems Modelling 2, 17938.
  Abstract Citation Links
• Article
  B. Czaja, M. Gutierrez, G. Závodszky, D. de Kanter, A. Hoekstra, and O. Eniola-Adefeso. The influence of red blood cell deformability on hematocrit profiles and platelet margination. PLoS Computational Biology 16(3), e1007716.
  Abstract Citation Links
• Article
  V. R. Melnikov, V. V. Krzhizhanovskaya, M. H. Lees, and P. M. A. Sloot. The impact of pace of life on pedestrian heat stress: A computational modelling approach. Environmental Research 186, 109397.
  Abstract Citation Links
• Article
  L. Crielaard, P. Dutta, R. Quax, M. Nicolaou, N. Merabet, K. Stronks, and P. M. A. Sloot. Social norms and obesity prevalence: From cohort to system dynamics models. Obesity Reviews 21(9), e13044.
  Abstract Citation Links
• Article
  A. Nikishova, G. E. Comi, and A. G. Hoekstra. Sensitivity analysis based dimension reduction of multiscale models. Mathematics and Computers in Simulation 170, pp. 205-220.
  Abstract Citation Links
• Proceedings
  I. Derevitskii, N. Kogtikov, M. H. Lees, W. Cai, and M. E. H. Ong. Risk-based AED placement - Singapore case. In: Computational Science – ICCS 2020. ISBN 9783030504236. IV, pp. 577-590.
  Abstract Citation Links
• PhD Thesis
  I. Anagnostou. Risk management in trading activities through the lens of complex systems theory. ISBN 9789464211009. Supervised by B. D. Kandhai and A. G. Hoekstra.
  Abstract Citation Links
• Article
  M. Girard and T. Bereau. Regulating Lipid Composition Rationalizes Acyl Tail Saturation Homeostasis in Ectotherms. Biophysical Journal 119(5), pp. 892-899.
  Abstract Citation Links
• Article
  M. Boersma, A. Maliutin, S. Sourabh, L. A. Hoogduin, and D. Kandhai. Reducing the complexity of financial networks using network embeddings. Scientific Reports 10, 17045.
  Abstract Citation Links
• Article
  A. M. Shibeko, B. Chopard, A. G. Hoekstra, and M. A. Panteleev. Redistribution of TPA Fluxes in the Presence of PAI-1 Regulates Spatial Thrombolysis. Biophysical Journal 119(3), pp. 638-651.
  Abstract Citation Links
• Article
  O. Har-Shemesh, R. Quax, J. S. Lansing, and P. M. A. Sloot. Questionnaire data analysis using information geometry. Scientific Reports 10, 8633.
  Abstract Citation Links
• Article
  A. H. R. Koch, S. Morsbach, T. Bereau, G. Lévêque, H.-J. Butt, M. Deserno, K. Landfester, and G. Fytas. Probing Nanoparticle/Membrane Interactions by Combining Amphiphilic Diblock Copolymer Assembly and Plasmonics. The journal of Physical Chemistry. B 124(5), pp. 742-750.
  Abstract Citation Links
• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030503710. I, pp. v-vi.
  Citation Links
• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030504267. V, pp. v-vi.
  Citation Links
• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030504205. III, pp. v-vi.
  Citation Links
• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030504366. VII, pp. v-vi.
  Citation Links
• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030504175. II, pp. v-vi.
  Citation Links
• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030504335. VI, pp. v-vi.
  Citation Links
• Proceedings
  V. V. Krzhizhanovskaya, G. Závodszky, M. Lees, J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira. Preface. In: Computational Science – ICCS 2020. ISBN 9783030504236. IV, pp. v-vi.
  Citation Links
• PhD Thesis
  B. J. M. van Rooij. Platelet adhesion and aggregation in high shear blood flow. ISBN 9789402820287. Supervised by A. G. Hoekstra and G. Závodszky.
  Abstract Citation Links
• Article
  C. Hoffmann, A. Centi, R. Menichetti, and T. Bereau. Molecular dynamics trajectories for 630 coarse-grained drug-membrane permeations. Scientific Data 7, 51.
  Abstract Citation Links
• Proceedings
  J. Kwak, M. H. Lees, W. Cai, and M. E. H. Ong. Modeling helping behavior in emergency evacuations using volunteer’s dilemma game. In: Computational Science – ICCS 2020. ISBN 9783030503710. I, pp. 513-523.
  Abstract Citation Links
• PhD Thesis
  V. Sivadasan. Microstructure dynamics in shear thickening suspensions. ISBN 9789402818611. Supervised by A. G. Hoekstra and D. Bonn.
  Abstract Citation Links
• Proceedings
  A. W. Abcouwer and Emoke Takács. Leadership, Management and Teams: A way of Being Successful. In: Proceedings of the 16th European Conference on Management, Leadership and Governance. ISBN 9781912764778. pp. 239-249.
  Abstract Citation Links
• Article
  O. Severiukhina, S. Kesarev, K. Bochenina, A. Boukhanovsky, M. H. Lees, and P. M. A. Sloot. Large-scale forecasting of information spreading. Journal of Big Data 7, 72.
  Abstract Citation Links
• Article
  C. Scherer, R. Scheid, D. Andrienko, and T. Bereau. Kernel-Based Machine Learning for Efficient Simulations of Molecular Liquids. Journal of Chemical Theory and Computation 16(5), pp. 3194-3204.
  Abstract Citation Links
• Article
  K. de Vries, A. Nikishova, B. Czaja, G. Závodszky, and A. G. Hoekstra. Inverse Uncertainty Quantification of a cell model using a Gaussian Process metamodel. International Journal for Uncertainty Quantification 10(4), pp. 333-349.
  Abstract Citation Links
• Article
  Y. B. Varolgünes, T. Bereau, and J. F. Rudzinski. Interpretable embeddings from molecular simulations using Gaussian mixture variational autoencoders. Machine Learning: Science and Technology 1(1), 015012.
  Abstract Citation Links
• Article
  A. Centi, A. Dutta, S. H. Parekh, and T. Bereau. Inserting Small Molecules across Membrane Mixtures. Biophysical Journal 118(6), pp. 1321-1332.
  Abstract Citation Links
• Article
  P. R. Konduri, H. A. Marquering, E. E. van Bavel, A. Hoekstra, C. B. L. M. Majoie, R. Padmos, and V. Azizi. In-Silico Trials for Treatment of Acute Ischemic Stroke. Frontiers in Neurology 11, 558125.
  Abstract Citation Links
• Article
  O. Metsker, K. Magoev, A. Yakovlev, S. Yanishevskiy, G. Kopanitsa, S. Kovalchuk, and V. V. Krzhizhanovskaya. Identification of risk factors for patients with diabetes: diabetic polyneuropathy case study. BMC Medical Informatics and Decision Making 20, 201.
  Abstract Citation Links
• Article
  B. Csippa, D. Gyürki, G. Závodszky, I. Szikora, and G. Paál. Hydrodynamic Resistance of Intracranial Flow-Diverter Stents. Cardiovascular Engineering and Technology 11(1), pp. 1-13.
  Abstract Citation Links
• Article
  C. Rauer and T. Bereau. Hydration free energies from kernel-based machine learning: Compound-database bias. Journal of Chemical Physics 153(1), 014101.
  Abstract Citation Links
• Proceedings
  Tjula Daelmans, Sophie Hutten, Judith Niks, E. Takács, and A. W. Abcouwer. Future Prospects of the Transitioning Energy. In: Proceedings of the 16th European Conference on Management, Leadership and Governance. ISBN 9781912764778. pp. 57-64.
  Abstract Citation Links
• Article
  C. Liu, J. G. Brandenburg, O. Valsson, K. Kremer, and T. Bereau. Free-energy landscape of polymer-crystal polymorphism. Soft Matter 16(42), pp. 9683-9692.
  Abstract Citation Links
• Article
  J. J. Lever, I. A. van de Leemput, E. Weinans, R. Quax, V. Dakos, E. H. van Nes, J. Bascompte, and M. Scheffer. Foreseeing the future of mutualistic communities beyond collapse. Ecology Letters 23(1), pp. 2-15.
  Abstract Citation Links
• Article
  M. V. Sheraton, G. G. Y. Chiew, V. Melnikov, E. Y. Tan, K. Q. Luo, N. Verma, and P. M. A. Sloot. Emergence of spatio-temporal variations in chemotherapeutic drug efficacy. BMC Cancer 20, 1201.
  Abstract Citation Links
• Proceedings
  L. E. Veen and A. G. Hoekstra. Easing Multiscale Model Design and Coupling with MUSCLE 3. In: Computational Science – ICCS 2020. ISBN 9783030504335. VI, pp. 425-438.
  Abstract Citation Links
• Proceedings
  B. Nannes, R. Quax, H. Ashikaga, M. Hocini, R. Dubois, O. Bernus, and M. Haïssaguerre. Early signs of critical slowing down in heart surface electrograms of ventricular fibrillation victims. In: Computational Science – ICCS 2020. ISBN 9783030504236. IV, pp. 334-347.
  Abstract Citation Links
• Proceedings
  A. Presbitero, R. Quax, V. V. Krzhizhanovskaya, and P. M. A. Sloot. Detecting critical transitions in the human innate immune system post-cardiac surgery. In: Computational Science – ICCS 2020. ISBN 9783030503710. I, pp. 371-384.
  Abstract Citation Links
• Article
  J. W. Barnett, C. R. Bilchak, Y. Wang, B. C. Benicewicz, L. A. Murdock, T. Bereau, and S. K. Kumar. Designing exceptional gas-separation polymer membranes using machine learning. Science Advances 6(20), eaaz4301.
  Abstract Citation Links
• Article
  Zhilian Huang, Eberta Tan, Elaine Lum, Peter Sloot, Bernhard Otto Boehm, and Josip Car. Correction: A Smartphone App to Improve Medication Adherence in Patients With Type 2 Diabetes in Asia: Feasibility Randomized Controlled Trial. JMIR mHealth and uHealth 8(4), e18411.
  Abstract Citation Links
• Article
  C. H. Tan, H.-S. Oh, V. M. Sheraton, E. Mancini, S. C. J. Loo, S. Kjelleberg, P. M. A. Sloot, and S. A. Rice. Convection and the Extracellular Matrix Dictate Inter- and Intra-Biofilm Quorum Sensing Communication in Environmental Systems. Environmental Science and Technology 54(11), p. 6730–6740.
  Abstract Citation Links
• Article
  I. Anagnostou, J. Sanchez Rivero, S. Sourabh, and D. Kandhai. Contagious defaults in a credit portfolio: a Bayesian network approach. Journal of Credit Risk 16(1), pp. 1-26.
  Abstract Citation Links
• Article
  P. J. S. Cardoso, J. M. F. Rodrigues, J. Monteiro, R. Lam, V. V. Krzhizhanovskaya, M. H. Lees, J. Dongarra, and P. M. A. Sloot. Computational Science in the Interconnected World: Selected papers from 2019 International Conference on Computational Science. Journal of Computational Science 47, 101222.
  Citation Links
• Article
  J. F. Rudzinski and T. Bereau. Coarse-grained conformational surface hopping. Journal of Chemical Physics 153(21), 214110.
  Abstract Citation Links
• PhD Thesis
  B. E. Czaja. Cell resolved blood flow modeling with the Lattice Boltzmann method. ISBN 9789464211191. Supervised by A. G. Hoekstra and G. Závodszky.
  Abstract Citation Links
• Article
  D. W. Wright, R. A. Richardson, W. Edeling, J. Lakhlili, R. C. Sinclair, V. Jancauskas, D. Suleimenova, B. Bosak, M. Kulczewski, T. Piontek, P. Kopta, I. Chirca, H. Arabnejad, O. O. Luk, O. Hoenen, J. Węglarz, D. Crommelin, D. Groen, and P. V. Coveney. Building Confidence in Simulation: Applications of EasyVVUQ. Advanced Theory and Simulations 3(8), 1900246.
  Abstract Citation Links
• Article
  J. Burger, D. C. van der Veen, D. J. Robinaugh, R. Quax, H. Riese, R. A. Schoevers, and S. Epskamp. Bridging the gap between complexity science and clinical practice by formalizing idiographic theories: a computational model of functional analysis. BMC Medicine 18, 99.
  Abstract Citation Links
• Article
  B. J. M. van Rooij, G. Závodszky, A. G. Hoekstra, and D. N. Ku. Biorheology of occlusive thrombi formation under high shear: in vitro growth and shrinkage. Scientific Reports 10, 18604.
  Abstract Citation Links
• Article
  D. Roy, D. Bernal, and M. Lees. An exploratory factor analysis model for slum severity index in Mexico City. Urban Studies 57(4), pp. 789-805.
  Abstract Citation Links
• Article
  M. Stieffenhofer, M. Wand, and T. Bereau. Adversarial reverse mapping of equilibrated condensed-phase molecular structures. Machine Learning: Science and Technology 1(4), 045014.
  Abstract Citation Links
• Book
  T. Abcouwer, E. Takács, and O.-P. Banga. Adaptive Information Management. ISBN 9789083045801.
  Abstract Citation
• Article
  P. S. Zun, A. J. Narracott, P. C. Evans, B. J. M. van Rooij, and A. G. Hoekstra. A particle-based model for endothelial cell migration under flow conditions. Biomechanics and Modeling in Mechanobiology 19(2), pp. 681-692.
  Abstract Citation Links
• Article
  G. Závodszky, B. Csippa, G. Paál, and I. Szikora. A novel virtual flow diverter implantation method with realistic deployment mechanics and validated force response. International Journal for Numerical Methods in Biomedical Engineering 36(6), e3340.
  Abstract Citation Links
• Article
  J. R. Helmus, M. H. Lees, and R. van den Hoed. A data driven typology of electric vehicle user types and charging sessions. Transportation Research. Part C, Emerging Technologies 115, 102637.
  Abstract Citation Links

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