Publications of the CSL group

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2016

• Article
  N. B. Melnikova, D. Jordan, and V. V. Krzhizhanovskaya. Corrigendum to “Experience of using FEM for real-time flood early warning systems: Monitoring and modelling Boston levee instability”. Journal of Computational Science 16, pp. 225-226.
  Abstract Citation Links
• Article
  S. A. Konakov, S. V. Dzyubanenko, and V. V. Krzhizhanovskaya. Computer Simulation Approach in Development of Propane-air Combustor Microreactor. Procedia Computer Science 101, pp. 76-85.
  Abstract Citation Links
• PhD Thesis
  N. Javaheri. Biosilicification mechanisms: An investigation using computational modeling and experimentation. ISBN 9789402801125. Supervised by P. M. A. Sloot and J. A. Kaandorp.
  Abstract Citation
• Chapter
  A. Mizeranschi, D. Groen, J. Borgdorff, A. G. Hoekstra, B. Chopard, and W. Dubitzky. Anatomy and Physiology of Multiscale Modeling and Simulation in Systems Medicine. In: Systems Medicine. ISBN 9781493932832. pp. 375-404.
  Abstract Citation Links
• Article
  V. G. Maslov, Andrey I. Svitenkov, and V. V. Krzhizhanovskaya. Abnormally high oscillator strengths of the graphene nanoribbons electronic spectrum. RSC Advances 6(79), pp. 75937-75942.
  Abstract Citation Links
• Article
  S. A. Konakov and V. V. Krzhizhanovskaya. A novel three-jet microreactor for localized metal-organic chemical vapour deposition of gallium arsenide. Journal of Physics. Conference Series 741, 012018.
  Abstract Citation Links
• Article
  S. A. Konakov and V. V. Krzhizhanovskaya. 3D simulation and analytical model of chemical heating during silicon wet etching in microchannels. Journal of Physics. Conference Series 681, 012035.
  Abstract Citation Links

2015

• Article
  A. V. Boukhanovsky, V. A. Ilyin, V. V. Krzhizhanovskaya, G. A. Athanassoulis, A. A. Klimentov, and P. M. A. Sloot. Young Researchers Advancing Computational Science: Perspectives of the Young Scientists Conference 2015. Procedia Computer Science 66, pp. 1-4.
  Abstract Citation Links
• PhD Thesis
  L. Mountrakis. Transport of blood cells studied with fully resolved models. ISBN 9789462597754. Supervised by P. M. A. Sloot and A. G. Hoekstra.
  Abstract Citation
• Article
  E. Merelli, M. Rucco, P. Sloot, and L. Tesei. Topological Characterization of Complex Systems: Using Persistent Entropy. Entropy 17(10), pp. 6872-6892.
  Abstract Citation Links
• Article
  S. Mei, B. Chen, Y. Zhu, M. H. Lees, A. V. Boukhanovsky, and P. M. A. Sloot. Simulating city-level airborne infectious diseases. Computers, Environment and Urban Systems 51, pp. 97-105.
  Abstract Citation Links
• Article
  A. V. Nenashev, F. Jansson, S. Petznick, M. Wiemer, P. J. Klar, A. V. Dvurechenskii, F. Gebhard, and S. D. Baranovskii. Scaling description of positive magnetoresistivity in doped dilute magnetic semiconductors. Journal of Magnetism and Magnetic Materials 383(1), pp. 44-49.
  Abstract Citation Links
• Article
  J. Borgdorff, H. Krishna, and M. H. Lees. SIM-CITY: An e-Science Framework for Urban Assisted Decision Support. Procedia Computer Science 51, pp. 2327-2336.
  Abstract Citation Links
• Article
  V. V. Krzhizhanovskaya, A. V. Dukhanov, A. Bilyatdinova, A. V. Boukhanovsky, and P. M. A. Sloot. Russian-Dutch double-degree Master’s programme in computational science in the age of global education. Journal of Computational Science 10, pp. 288-298.
  Abstract Citation Links
• Article
  D. Abramson, V. V. Krzhizhanovskaya, and M. Lees. Perspectives of the International Conference of Computational Science 2014. Journal of Computational Science 10, pp. 247-248.
  Abstract Citation Links
• Article
  L. Mountrakis, E. Lorenz, O. Malaspinas, S. Alowayyed, B. Chopard, and A. G. Hoekstra. Parallel performance of an IB-LBM suspension simulation framework. Journal of Computational Science 9, pp. 45-50.
  Abstract Citation Links
• Article
  P. S. Zun and A. G. Hoekstra. On the Possible Interaction Mechanism between Collateral Vessels and Restenosis. Procedia Computer Science 66, pp. 412-418.
  Abstract Citation Links
• Article
  N. Melnikova, D. Jordan, V. Krzhizhanovskaya, and P. Sloot. Numerical prediction of the IJkDijk trial embankment failure. Proceedings of the Institution of Civil Engineers. Geotechnical Engineering 168(2), pp. 158-171.
  Abstract Citation Links
• Article
  V. V. Krzhizhanovskaya, D. Groen, B. Bosak, and A. G. Hoekstra. Multiscale Modelling and Simulation Workshop: 12 Years of Inspiration. Procedia Computer Science 51, pp. 1082-1087.
  Abstract Citation Links
• Article
  S. A. Konakov and V. V. Krzhizhanovskaya. Modeling chemical vapor deposition of silicon dioxide in microreactors at atmospheric pressure. Journal of Physics. Conference Series 574, 012145.
  Abstract Citation Links
• Book
  S. Koziel, L. Leifsson, M. Lees, V. V. Krzhizhanovskaya, J. Dongarra, and P. M. A. Sloot. International Conference On Computational Science, ICCS 2015: Computational Science at the Gates of Nature.
  Citation Links
• Article
  S. Litescu, V. Viswanathan, M. Lees, A. Knoll, and H. Aydt. Information impact on transportation systems. Journal of Computational Science 9, pp. 88-93.
  Abstract Citation Links
• Article
  H. Xu, C. D. Erdbrink, and V. V. Krzhizhanovskaya. How to Speed up Optimization? Opposite-Center Learning and Its Application to Differential Evolution. Procedia Computer Science 51, pp. 805-814.
  Abstract Citation Links
• Article
  P. A. C. Duijn and P. M. A. Sloot. From Data to Disruption. Digital Investigation 11, pp. 39-45.
  Abstract Citation Links
• Article
  A. I. Svitenkov, S. A. Chivilikhin, A. G. Hoekstra, and A. V. Boukhanovsky. Fluid Simulations with Atomistic Resolution: Multiscale Model with Account of Nonlocal Momentum Transfer. Procedia Computer Science 51, pp. 1108-1117.
  Abstract Citation Links
• Article
  N. B. Melnikova, D. Jordan, and V. V. Krzhizhanovskaya. Experience of using FEM for real-time flood early warning systems: Monitoring and modeling Boston levee instability. Journal of Computational Science 10, pp. 13-25.
  Abstract Citation Links
• Article
  M. Wagner, W. Cai, M. Lees, and H. Aydt. Evolving agent-based models using self-adaptive complexification. Journal of Computational Science 10, pp. 351-359.
  Abstract Citation Links
• Article
  C. D. Erdbrink and V. V. Krzhizhanovskaya. Differential evolution for system identification of self-excited vibrations. Journal of Computational Science 10, pp. 360-369.
  Abstract Citation Links
• Proceedings
  W. Belcher, T. Camp, and V. V. Krzhizhanovskaya. Detecting erosion events in earth dam and levee passive seismic data with clustering. In: 2015 IEEE 14th International Conference on Machine Learning and Applications. ISBN 9781509002870. pp. 903-910.
  Abstract Citation Links
• Article
  J. Zhong, N. Hu, W. Cai, M. Lees, and L. Luo. Density-based evolutionary framework for crowd model calibration. Journal of Computational Science 6, pp. 11-22.
  Abstract Citation Links
• Article
  V. R. Melnikov, V. V. Krzhizhanovskaya, A. V. Boukhanovsky, and P. M. A. Sloot. Data-driven modeling of transportation systems and traffic data analysis during a major power outage in the Netherlands. Procedia Computer Science 66, pp. 336-345.
  Abstract Citation Links
• Article
  Vítor V. Vasconcelos, Francisco C. Santos, and Jorge M. Pacheco. Cooperation dynamics of polycentric climate governance. Mathematical models & methods in applied sciences 25(13), pp. 2503-2517.
  Abstract Citation Links
• Article
  M. A. Yurkin, V. P. Maltsev, and A. G. Hoekstra. Convergence of the discrete dipole approximation. I. Theoretical analysis: erratum. Journal of the Optical Society of America. A, Optics, Image Science and Vision 32(12), pp. 2407-2408.
  Citation Links
• Article
  S. Koziel, L. Leifsson, M. Lees, V. V. Krzhizhanovskaya, J. Dongarra, and P. M. A. Sloot. Computational Science at the Gates of Nature, preface for ICCS 2015. Procedia Computer Science 51, pp. 1-8.
  Citation Links
• Article
  S. Mei, N. Zarrabi, M. Lees, and P. M. A. Sloot. Complex agent networks: An emerging approach for modeling complex systems. Applied Soft Computing 37, pp. 311-321.
  Abstract Citation Links
• Article
  A. L. Pyayt, D. V. Shevchenko, A. P. Kozionov, I. I. Mokhov, B. Lang, V. V. Krzhizhanovskaya, and P. M. A. Sloot. Combining data-driven methods with finite element analysis for flood early warning systems. Procedia Computer Science 51, pp. 2347-2356.
  Abstract Citation Links
• Article
  Jorge M. Pacheco, Vítor V. Vasconcelos, Francisco C. Santos, and Brian Skyrms. Co-evolutionary Dynamics of Collective Action with Signaling for a Quorum. PLoS Computational Biology 11(2), e1004101.
  Abstract Citation Links
• Article
  H. Tahir, I. Niculescu, C. Bona-Casas, R. M. H. Merks, and A. G. Hoekstra. An in silico study on the role of smooth muscle cell migration in neointimal formation after coronary stenting. Journal of the Royal Society Interface 12(108), 20150358.
  Abstract Citation Links
• Proceedings
  Y. Xu, W. Cai, H. Aydt, M. Lees, and D. Zehe. An Asynchronous Synchronization Strategy for Parallel Large-scale Agent-based Traffic Simulations. In: SIGSIM-PADS'15. ISBN 9781450335836, 9781450335652. pp. 259-269.
  Abstract Citation Links
• Article
  L. Luo, W. Cai, S. Zhou, M. Lees, and H. Yin. A review of interactive narrative systems and technologies. Simulation 91(2), pp. 126-147.
  Abstract Citation Links
• Article
  D. Pelzer, J. Xiao, D. Zehe, M. H. Lees, A. C. Knoll, and H. Aydt. A partition-based match making algorithm for dynamic ridesharing. IEEE Transactions on Intelligent Transportation Systems 16(5), pp. 2587-2598.
  Abstract Citation Links
• Article
  S. A. Konakov and V. V. Krzhizhanovskaya. A mathematical model and simulation results of plasma enhanced chemical vapor deposition of silicon nitride films. Journal of Physics. Conference Series 574, 012144.
  Abstract Citation Links

2014

• Proceedings
  S. A. Konakov and V. V. Krzhizhanovskaya. Компьютерное моделирование и экспериментальные исследования закономерностей плазмохимического осаждения тонких пленок нитрида кремния. In: Неделя науки СПбГПУ : материалы Научно-практической конференции с международным участием, 2-7 декабря 2013 года. ISBN 9785742243472, 9785742243243. 2, pp. 31-33.
  Citation Links
• Article
  L. Mountrakis, E. Lorenz, and A. G. Hoekstra. Validation of an efficient two-dimensional model for dense suspensions of red blood cells. International Journal of Modern Physics C 25(12), 1441005.
  Abstract Citation Links
• Article
  N. Javaheri, R Dries, and J. Kaandorp. Understanding the Sub-Cellular Dynamics of Silicon Transportation and Synthesis in Diatoms Using Population-Level Data and Computational Optimization. PLoS Computational Biology 10(6), e1003687.
  Abstract Citation Links
• Proceedings
  H. Aydt, M. H. Lees, S. J. Turner, and W. Cai. Toward Simulation-Based Egress Optimization in Smart Buildings Using Symbiotic Simulation. In: Pedestrian and Evacuation Dynamics 2012. ISBN 9783319024462. pp. 987-999.
  Abstract Citation Links
• Article
  W. Duan, R. Quax, M. Lees, X. Qiu, and P. M. A. Sloot. Topology dependent epidemic spreading velocity in weighted networks. Journal of Statistical Mechanics : Theory and Experiment 2014(12), P12020.
  Abstract Citation Links
• Article
  A. L. Pyayt, A. P. Kozionov, I. I. Mokhov, B. Lang, R. J. Meijer, V. V. Krzhizhanovskaya, and P. M. A. Sloot. Time-frequency Methods for Structural Health Monitoring. Sensors 14(3), pp. 5147-5173.
  Abstract Citation Links
• MSc Thesis
  K. Mikhailov. The use of genetic algorithms to find an optimum MHD as an approximate description of holes. Supervised by S. Markoff and A. Boukhanovsky.
  Citation
• Article
  P. Ramos-Silva, J. Kaandorp, F. Herbst, L. Plasseraud, G. Alcaraz, C. Stern, M. Corneillat, N. Guichard, C. Durlet, G. Luquet, and F. Marin. The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization. PLoS ONE 9(6), e97454.
  Abstract Citation Links
• Article
  D. Roy, M. H. Lees, B. Palavalli, K. Pfeffer, and P. M. A. Sloot. The emergence of slums: A contemporary view on simulation models. Environmental Modelling & Software 59, pp. 76-90.
  Abstract Citation Links
• Article
  P. A. C. Duijn, V. Kashirin, and P. M. A. Sloot. The Relative Ineffectiveness of Criminal Network Disruption. Scientific Reports 4, 4238.
  Abstract Citation Links
• Article
  V. Savickas, N. Hari, T. Wood, and D. Kandhai. Super Fast Greeks: An Application to Counterparty Valuation Adjustments. Wilmott 69, pp. 76-80.
  Abstract Citation Links
• MSc Thesis
  A. Klimkina. Study of the news spread among social network user with respect to their stakeholdership. Supervised by R. Quax and A. Yakushev.
  Citation
• Report
  N. B. Melnikova, D. Jordan, V. V. Krzhizhanovskaya, and P. M. A. Sloot. Slope Instability of the Earthen Levee in Boston, UK: Numerical Simulation and Sensor Data Analysis.
  Abstract Citation Links
• Proceedings
  A. S. Mordvintsev, V. V. Krzhizhanovskaya, M. H. Lees, and P. M. A. Sloot. Simulation of City Evacuation Coupled to Flood Dynamics. In: Pedestrian and Evacuation Dynamics 2012. ISBN 9783319024462. pp. 485-499.
  Abstract Citation Links
• Article
  A. L. Pyayt, A. P. Kozionov, V. T. Kusherbaeva, I. I. Mokhov, V. V. Krzhizhanovskaya, B. J. Broekhuijsen, R. J. Meijer, and P. M. A. Sloot. Signal analysis and anomaly detection for flood early warning systems. Journal of Hydroinformatics 16(5), pp. 1025-1043.
  Abstract Citation Links
• Article
  S. A. Cheong, T. L. Tan, C.-C. Chen, W.-L. Chang, Z. Liu, L. Y. Chew, P. M. A. Sloot, and N. F. Johnson. Short-Term Forecasting of Taiwanese Earthquakes Using a Universal Model of Fusion-Fission Processes. Scientific Reports 4, 3624.
  Abstract Citation Links
• Article
  C. D. Erdbrink, V. V. Krzhizhanovskaya, and P. M. A. Sloot. Reducing cross-flow vibrations of underflow gates: experiments and numerical studies. Journal of Fluids and Structures 50, pp. 25-48.
  Abstract Citation Links
• Article
  V. Viswanathan, C. E. Lee, M. H. Lees, S. A. Cheong, and P. M. A. Sloot. Quantitative Comparison Between Crowd Models for Evacuation Planning and Evaluation. The European Physical Journal B. Condensed Matter Physics 87(2), 27.
  Abstract Citation Links
• Proceedings
  D. Abramson, M. H. Lees, V. V. Krzhizhanovskaya, J. J. Dongarra, and P. M. A. Sloot. Proceedings of the International Conference on Computational Science, ICCS 2014. Procedia Computer Science 29.
  Citation Links
• Article
  J. Borgdorff, M. Ben Belgacem, C. Bona-Casas, L. Fazendeiro, D. Groen, O. Hoenen, A. Mizeranschi, J. L. Sutter, D. Coster, P. V. Coveney, W. Dubitzky, A. G. Hoekstra, P. Strand, and B. Chopard. Performance of distributed multiscale simulations. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences 372(2021), 20130407.
  Abstract Citation Links
• Article
  S. Karabasov, D. Nerukh, A. Hoekstra, B. Chopard, and P. V. Coveney. Multiscale modelling: approaches and challenges. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences 372(2021), 20130390.
  Citation Links
• Article
  A. Hoekstra, B. Chopard, and P. Coveney. Multiscale modelling and simulation: a position paper. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences 372(2021), 20130377.
  Abstract Citation Links
• MSc Thesis
  A. Chirkin. Multi-objective optimization approach to infer Drosophila gene regulatory parameters. Supervised by A. S. Z. Belloum and S. Kovalchuk.
  Citation Links
• Chapter
  A. Hoekstra, B. Chopard, and P. Lawford. Multi-Scale Modelling and Simulation. In: Computational biomedicine: modelling the human body. ISBN 9780199658183. pp. 138-160.
  Citation Links
• PhD Thesis
  C. D. Erdbrink. Modelling flow-induced vibrations of gates in hydraulic structures. ISBN 9789064648007. Supervised by P. M. A. Sloot and V. V. Krzhizhanovskaya.
  Abstract Citation
• Article
  L. J. Dijkstra, A. V. Yakushev, P. A. C. Duijn, A. V. Boukhanovsky, and P. M. A. Sloot. Inference of the Russian drug community from one of the largest social networks in the Russian Federation. Quality and Quantity 48(5), pp. 2739-2755.
  Abstract Citation Links
• Article
  S. Mei, Y. Zhu, X. Qiu, X. Zhou, Z. Zu, A. V. Boukhanovsky, and P. M. A. Sloot. Individual decision making can drive epidemics: a fuzzy cognitive map study. IEEE Transactions on Fuzzy Systems 22(2), pp. 264-273.
  Abstract Citation Links
• Article
  C. D. Erdbrink and V. V. Krzhizhanovskaya. Identifying Self-excited Vibrations with Evolutionary Computing. Procedia Computer Science 29, pp. 637-647.
  Abstract Citation Links
• Article
  C. M. Amatruda, C. Bona Casas, B. K. Keller, H. Tahir, G. Dubini, A. Hoekstra, D. R. Hose, P. Lawford, F. Migliavacca, A. J. Narracott, and J. Gunn. From histology and imaging data to models for in-stent restenosis. The international journal of artificial organs 37(10), pp. 786-800.
  Abstract Citation Links
• Article
  C. D. Erdbrink, V. V. Krzhizhanovskaya, and P. M. A. Sloot. Free-surface flow simulations for discharge-based operation of hydraulic structure gates. Journal of Hydroinformatics 16(1), pp. 189-206.
  Abstract Citation Links
• PhD Thesis
  N. B. Melnikova. Finite element analysis of levee stability for flood early warning systems. ISBN 9789064648069. Supervised by P. M. A. Sloot and V. V. Krzhizhanovskaya.
  Abstract Citation
• Article
  N. B. Melnikova, D. Jordan, V. V. Krzhizhanovskaya, and P. M. A. Sloot. Experimental Collapse of the IJkDijk: Numerical Prediction of Failure Mode and Posterior Sensor Data Analysis. Canadian Geotechnical Journal .
  Citation
• Article
  M. Wagner, W. Cai, M. H. Lees, and H. Aydt. Evolving Agent-based Models Using Complexification Approach. Procedia Computer Science 29, pp. 310-321.
  Abstract Citation Links
• Article
  Flávio L. Pinheiro, Vítor V. Vasconcelos, Francisco C. Santos, and Jorge M. Pacheco. Evolution of All-or-None Strategies in Repeated Public Goods Dilemmas. PLoS Computational Biology 10(11).
  Abstract Citation Links
• Article
  J. O. Oelerich, F. Jansson, A. V. Nenashev, F. Gebhard, and S. D. Baranovskii. Energy position of the transport path in disordered organic semiconductors. Journal of Physics-Condensed Matter 26(25), 255801.
  Abstract Citation Links
• Article
  H. Tahir, C. Bona-Casas, A. J. Narracott, J. Iqbal, J. Gunn, P. Lawford, and A. G. Hoekstra. Endothelial repair process and its relevance to longitudinal neointimal tissue patterns: Comparing histology with in silico modelling. Journal of the Royal Society Interface 11(94), 20140022.
  Abstract Citation Links
• Proceedings
  Y. Xu, W. Cai, H. Aydt, and M. Lees. Efficient graph-based dynamic load-balancing for parallel large-scale agent-based traffic simulation. In: Proceedings of the 2014 Winter Simulation Conference: exploring big data through simulation: December 7-10, 2014, Westin Savannah Harbor Resort, Savannah, GA. ISBN 9781479974849. pp. 3483-3494.
  Abstract Citation Links
• Article
  C. S. L. de Graaf, Q. Feng, D. Kandhai, and C. W. Oosterlee. Efficient Computation of Exposure Profiles for Counterparty Credit Risk. International Journal of Theoretical and Applied Finance 17(4), 1450024.
  Abstract Citation Links
• Proceedings
  J. Zhong, W. Cai, L. Luo, and M. Lees. EA-based evacuation planning using agent-based crowd simulation. In: Proceedings of the 2014 Winter Simulation Conference: exploring big data through simulation: December 7-10, 2014, Westin Savannah Harbor Resort, Savannah, GA. ISBN 9781479974849. pp. 395-406.
  Abstract Citation Links
• Proceedings
  A. Bilyatdinova, A. Dukhanov, K. Bochenina, A. V. Boukhanovsky, V. V. Krzhizhanovskaya, and P. M. A. Sloot. Dutch-Russian Double Degree Master's Program Curricula in Computational Science and High Performance Computing. In: 2014 IEEE Frontiers in Education Conference. ISBN 9781479939213, 9781479939220.
  Abstract Citation Links
• Article
  A. V. Dukhanov, V. V. Krzhizhanovskaya, A. Bilyatdinova, A. V. Boukhanovsky, and P. M. A. Sloot. Double-degree Master's Program in Computational Science: Experiences of ITMO University and University of Amsterdam. Procedia Computer Science 29, pp. 1433-1445.
  Abstract Citation Links
• Article
  J. Borgdorff, M. Mamonski, B. Bosak, K. Kurowski, M. Ben Belgacem, B. Chopard, D. Groen, P. V. Coveney, and A. G. Hoekstra. Distributed multiscale computing with MUSCLE 2, the Multiscale Coupling Library and Environment. Journal of Computational Science 5(5), pp. 719-731.
  Abstract Citation Links
• PhD Thesis
  J. Borgdorff. Distributed multiscale computing. ISBN 9789462592353. Supervised by P. M. A. Sloot and A. G. Hoekstra.
  Abstract Citation
• PhD Thesis
  A. L. Pyayt. Data-driven methods in application to flood defence systems monitoring and analysis. ISBN 9789064648052. Supervised by P. M. A. Sloot and V. V. Krzhizhanovskaya.
  Abstract Citation
• Article
  Vítor V. Vasconcelos, Francisco C. Santos, Jorge M. Pacheco, and Simon A. Levin. Climate policies under wealth inequality. Proceedings of the National Academy of Sciences of the United States of America 111(6), pp. 2212-2216.
  Abstract Citation Links
• Article
  D. Abramson, M. Lees, V. V. Krzhizhanovskaya, J. Dongarra, and P. M. A. Sloot. Big Data Meets Computational Science: preface for ICCS 2014. Procedia Computer Science 29, pp. 1-7.
  Citation Links
• Proceedings
  J. Zhong, L. Luo, W. Cai, and M. Lees. Automatic Rule Identification for Agent-Based Crowd Models Through Gene Expression Programming. In: AAMAS '14: proceedings of the 2014 International Conference on Autonomous Agents & Multiagent Systems. ISBN 9781450327381. pp. 1125-1132.
  Abstract Citation Links
• Article
  T. I. Jung, F. Vogiatzian, O. Har-Shemesh, C. P. Fitzsimons, and R. Quax. Applying Information Theory to Neuronal Networks: From Theory to Experiments. Entropy 16(11), pp. 5721-5737.
  Abstract Citation Links
• Article
  Y. H. A. Teo, V. Viswanathan, M. Lees, and W. Cai. Analysing the Effectiveness of Wearable Wireless Sensors in Controlling Crowd Disasters. Procedia Computer Science 29, pp. 1590-1599.
  Abstract Citation Links
• PhD Thesis
  E. Mancini. Agent based modeling of viral infections: an investigation across several spatio-temporal scales. Supervised by P. M. A. Sloot.
  Citation Links
• Article
  Q. C. Bui, P. M. A. Sloot, E. M. van Mulligen, and J. A. Kors. A novel feature-based approach to extract drug-drug interactions from biomedical text. Bioinformatics 30(23), pp. 3365-3371.
  Abstract Citation Links
• Article
  C. Tamulonis and J. Kaandorp. A model of filamentous cyanobacteria leading to reticulate pattern formation. Life (Basel) 4(3), pp. 433-456.
  Abstract Citation Links
• Article
  B. Chopard, J. Borgdorff, and A. G. Hoekstra. A framework for multi-scale modelling. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences 372(2021), 2013037813.
  Abstract Citation Links
• Article
  D. Botman, E. Röttinger, M. Q. Martindale, J. de Jong, and J. A. Kaandorp. A computational approach towards a gene regulatory network for the developing Nematostella vectensis gut. PLoS ONE 9(7), e103341.
  Abstract Citation Links
• Book
  D. Abramson, M. Lees, V. Krzhizhanovskaya, J. Dongarra, and P. M. A. Sloot. 2014 International Conference on Computational Science.
  Citation Links

2013

• Article
  A. L. Pyayt, I. I. Mokhov, and A. P. Kozionov. Интеллектуальная система мониторинга состояния объектов критической инфраструктуры. Integral 2013(4), pp. 84-86.
  Abstract Citation Links
• Article
  L. Mountrakis, E. Lorenz, and A. G. Hoekstra. Where do the platelets go? A simulation study of fully resolved blood flow through aneurysmal vessels. Interface Focus 3(2), p. 20120089.
  Abstract Citation Links
• Proceedings
  E. R. Dugundji and L. Gulyás. Understanding Emergence in a Fully-Specified Nested Logit Model.
  Citation

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