Publications of the CSL group

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2009

• Proceedings
  G. Allen, J. Nabrzyski, E. Seidel, G. D. van Albada, J. Dongarra, and P. M. A. Sloot. In: Computational Science - ICCS 2009: 9th International Conference, Baton Rouge, LA, USA, Proceedings, Part I. ISBN 978-3-642-01969-2. Lecture Notes in Computer Science 5544.
  Citation Links

2008

• Proceedings
  E. V. Zudilova-Seinstra, J. Adriaanse, and A. Berg. Visualizing climate data on a tiled panel display: A user-centered approach. In: IADIS International Conference on Computer Graphics and Visualization 2008. ISBN 9789728924638. pp. 197-202.
  Abstract Citation Links
• Proceedings
  M. Bubak, T. Gubala, M. Malawski, B. Balis, W. Funika, T. Bartynski, E. Ciepiela, D. Harezlak, M. Kasztelnik, J. Kocot, D. Krol, P. Nowakowski, M. Pelczar, J. Wach, M. Assel, and A. Tirado-Ramos. Virtual laboratory for development and execution of biomedical collaborative applications. In: Proceedings of the 21st IEEE international symposium on computer-based medical systems: June 17-19, 2008, Jyväskula, Finland. ISBN 9780769531656. pp. 373-378.
  Abstract Citation Links
• Article
  P. Sloot. ViroLab: From the molecule to the man. eStrategies Projects pp. 53-55.
  Abstract Citation Links
• Article
  P. Sloot, P. Coveney, M. T. Bubak, A.-M. Vandamme, B. Ó Nuallain, D. van de Vijver, and C. Boucher. ViroLab: A collaborative decision support system in viral disease treatment. Reviews in Antiviral Therapy 3, pp. 4-7.
  Abstract Citation Links
• Proceedings
  T. Gubala, B. Baliś, M. Malawski, M. Kasztelnik, P. Nowakowski, M. Assel, D. Harężlak, T. Bartyński, J. Kocot, E. Ciepiela, D. Król, J. Wach, M. Pelczar, W. Funika, and M. Bubak. ViroLab Virtual Laboratory. In: Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings. ISBN 9788391514191. pp. 35-40.
  Citation Links
• Proceedings
  P. M. A. Sloot, A. Tirado-Ramos, G. Ertaylan, B. O Nuallain, D. van de Vijver, C. A. Boucher, and M. Bubak. VIROLAB: A distributed decision support system for viral disease treatment. In: Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings. ISBN 9788391514191. pp. 33-34.
  Citation Links
• Article
  J. L. Guisado, F. Fernández de Vega, F. Jiménez Morales, K. A. Iskra, and P. M. A. Sloot. Using cellular automata for parallel simulation of laser dynamics with dynamic load balancing. International Journal of High Performance Systems Architecture (IJHPSA) 1(4), pp. 251-259.
  Abstract Citation Links
• Article
  K. Rycerz, M. Bubak, and P. M. A. Sloot. Using HLA and Grid for distributed multiscale simulations. Lecture Notes in Computer Science 4967, pp. 780-787.
  Abstract Citation Links
• Proceedings
  W. Funika, D. Harężlak, D. Król, P. Pęgiel, and M. Bubak. User interfaces of the Virolab Virtual Laboratory. In: Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings. ISBN 9788391514191. pp. 47-52.
  Citation Links
• Article
  T. Bartyński, M. Malawski, T. Gubała, and M. Bubak. Universal Grid client: Grid Operation Invoker. Lecture Notes in Computer Science 4967, pp. 1068-1077.
  Abstract Citation Links
• Article
  T. Gubala, M. Kasztelnik, M. Malawski, and M. Bubak. Towards a system-level science support. Lecture Notes in Computer Science pp. 56-65.
  Abstract Citation Links
• Proceedings
  A. Wibisono, Z. Zhao, A. Belloum, and M. Bubak. Towards a Virtual Laboratory for interactive parameter sweep applications on the Grid. In: Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings. ISBN 9788391514191. pp. 266-271.
  Citation Links
• Chapter
  A. G. Hoekstra, S. F. Portegies Zwart, M. T. Bubak, and P. M. A. Sloot. Towards Distributed Petascale Computing. In: Petascale Computing: Algorithms and Applications. ISBN 978-1-58488-909-0. pp. 147-164.
  Citation Links
• Article
  D. J. W. Evans, P. V. Lawford, J. Gunn, D. Walker, D. R. Hose, R. H. Smallwood, B. Chopard, M. Krafczyk, J. Bernsdorf, and A. Hoekstra. The application of multiscale modelling to the process of development and prevention of stenosis in a stented coronary artery. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences 366(1879), pp. 3343-3360.
  Abstract Citation Links
• MSc Thesis
  B. Rexhepi. The Volatility Smile Dynamics Implied by Smile-Consistent Option Pricing Models and Empirical Data. Supervised by B. D. Kandhai and G.-Z. Qiu.
  Citation Links
• Proceedings
  M. A. Yurkin, D. de Kanter, and A. G. Hoekstra. Study of light scattering by a granulated coated sphere - a model of granulated blood cells. In: 11th Electromagnetic & Light Scattering Conference: Extended abstracts: 7-12 September 2008, de Havilland Campus, University of Hertfordshire. pp. 299-302.
  Abstract Citation Links
• Article
  P. M. A. Sloot, S. V. Ivanov, A. V. Boukhanovsky, D. A. M. C. van de Vijver, and C. A. B. Boucher. Stochastic simulation of HIV population dynamics through complex network modelling. International Journal of Computer Mathematics 85(8), pp. 1175-1187.
  Abstract Citation Links
• PhD Thesis
  E. Gaburov. Stellar collisions in young star clusters. Supervised by R. A. M. J. Wijers, P. M. A. Sloot, S. F. Portegies Zwart, and O. R. Pols.
  Citation Links
• Article
  S. Harfst, S. Portegies Zwart, and S. McMillan. Status and future of MUSE. Astronomische Nachrichten 329(9-10), pp. 885-891.
  Abstract Citation Links
• Other: misc
  V. V. Krzhizhanovskaya and A. G. Hoekstra. Special Issue on Simulation of Multiphysics Multiscale Systems. International Journal for Multiscale Computational Engineering 6(1).
  Citation Links
• PhD Thesis
  J. M. Bernsdorf. Simulation of complex flows and multi-physics with the Lattice-Boltzmann method. Supervised by P. M. A. Sloot and A. G. Hoekstra.
  Citation Links
• Article
  V. V. Krzhizhanovskaya and A. G. Hoekstra. Simulation of Multiphysics Multiscale Systems, 5th International Workshop. Lecture Notes in Computer Science pp. 165-166.
  Abstract Citation Links
• Article
  J. Cui, J. A. Kaandorp, and C. M. Lloyd. Simulating in vitro transcriptional response of zinc homeostasis system in Escherichia coli. BMC Systems Biology 2, p. 89.
  Abstract Citation Links
• Article
  J. Cui and J. A. Kaandorp. Simulating complex calcium-calcineurin signaling network. Lecture Notes in Computer Science pp. 110-119.
  Abstract Citation Links
• Article
  D. Groen, S. Portegies Zwart, S. McMillan, and J. Makino. Simulating N-body systems on the grid using dedicated hardware. Lecture Notes in Computer Science pp. 86-95.
  Abstract Citation Links
• Article
  E. Zudilova-Seinstra, N. Yang, L. Axner, A. Wibisono, and D. Vasunin. Service-oriented visualization applied to medical data analysis. Service Oriented Computing and Applications 2(4), pp. 187-201.
  Abstract Citation Links
• Article
  A. Tirado-Ramos. Second Workshop on Teaching Computational Science WTCS 2008. Lecture Notes in Computer Science 5102, pp. 657-658.
  Abstract Citation Links
• Article
  A. Caiazzo, J. L. Falcone, B. Chopard, and A. G. Hoekstra. Scale-splitting error in complex automata models for reaction-diffusion systems. Lecture Notes in Computer Science pp. 291-300.
  Abstract Citation Links
• Article
  M. Wiens, S. I. Belikov, O. V. Kaluzhnaya, T. Adell, H. C. Schröder, S. Perovic-Ottstadt, J. A. Kaandorp, and W. E. G. Müller. Regional and modular expression of morphogenetic factors in the demosponge Lubomirskia baicalensis. Micron 39(4), pp. 447-460.
  Abstract Citation Links
• Article
  S. F. Portegies Zwart and H.-C. Chen. Reconstructing the initial relaxation time of young star clusters in the Large Magellanic Cloud. Astronomical Society of the Pacific conference series 388, pp. 329-336.
  Abstract Citation Links
• Article
  B. Baliś, M. Bubak, and J. Wach. Provenance tracking in the ViroLab Virtual Laboratory. Lecture Notes in Computer Science 4967, pp. 381-390.
  Abstract Citation Links
• Proceedings
  B. Balis, M. Bubak, M. Pelczar, and J. Wach. Provenance tracking and querying in the ViroLab Virtual Laboratory. In: CCGRID 2008: Eighth IEEE International Symposium on Cluster Computing and the Grid: proceedings: 19-22 May, 2008, Lyon, France. ISBN 9780769531564. pp. 675-680.
  Abstract Citation Links
• Proceedings
  B. Balis, M. Bubak, M. Pelczar, and J. Wach. Provenance tracking and querying in ViroLab. In: Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings. ISBN 9788391514191. pp. 71-76.
  Citation Links
• Article
  B. Baliś, M. Bubak, M. Pelczar, and J. Wach. Provenance querying for end-users: A drug resistance case study. Lecture Notes in Computer Science 5103, pp. 80-89.
  Abstract Citation Links
• Proceedings
  K. Rycerz, M. Bubak, P. Sloot, and V. Getov. Problem solving environment for distributed interactive applications. In: Achievements in European research on grid systems: CoreGRID Integration Workshop 2006 (selected papers), October 19-20, Krakow, Poland. ISBN 9780387728117. pp. 55-66.
  Abstract Citation Links
• Proceedings
  R. M. Badia, R. Sirvent, M. T. Bubak, W. Funika, and P. Machner. Performance monitoring of Grid superscalar: visualization modes. In: CoreGRID integration workshop 2008 -- Integrated Research in Grid Computing: April 24, Hersonissos, Crete, Greece. ISBN 978-960-524-260-2. pp. 266-274.
  Citation
• Proceedings
  R. M. Badia, R. Sirvent, M. Bubak, W. Funika, and P. Machner. Performance monitoring of Grid superscalar with OCM-G/G-PM: visualization modes. In: Integrated research in grid computing. ISBN 9789605242602. pp. 265-274.
  Citation Links
• Proceedings
  R. M. Badia, R. Sirvent, M. Bubak, W. Funika, and P. Machner. Performance monitoring of GRID superscalar with OCM-G/G-PM: Integration issues. In: Achievements in European reseach on Grid systems: CoreGRID Integration Workshop 2006 (selected papers): October 19-20, Krakow, Poland. ISBN 9780387728117. pp. 193-205.
  Abstract Citation Links
• Article
  L. Axner, J. Bernsdorf, T. Zeiser, P. Lammers, J. Linxweiler, and A. G. Hoekstra. Performance evaluation of a parallel sparse lattice Boltzmann solver. Journal of computational Physics 227(10), pp. 4895-4911.
  Abstract Citation Links
• Proceedings
  V. V. Krzhizhanovskaya, V. V. Korkhov, M. A. Zatevakhin, and Y. E. Gorbachev. Parallel distributed computing in modeling of the nanomaterials production technologies. In: Proceedings of the International Conference on Parallel Computing Technologies (PaVT'2008), St. Petersburg, Russia. ISBN 9785696037202. pp. 585-590.
  Abstract Citation Links
• Proceedings
  J. L. Guisado, F. Fernández de Vega, F. Jiménez Morales, K. A. Iskra, and P. M. A. Sloot. Parallel Cellular Automata-based simulation of laser dynamics using dynamic load balancing. In: First International Workshop on Parallel Architectures and Bioinspired Algorithms. ISBN 9788469165126. pp. 49-55.
  Abstract Citation Links
• Article
  M. B. N. Kouwenhoven, A. G. A. Brown, S. P. Goodwin, S. F. Portegies Zwart, and L. Kaper. Pairing mechanisms for binary stars. Astronomische Nachrichten 329(9-10), pp. 984-987.
  Abstract Citation Links
• Proceedings
  M. Malawski, J. Kocot, E. Ciepiela, and M. Bubak. Optimization of application execution in the ViroLab Virtual Laboratory. In: Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings. ISBN 9788391514191. pp. 65-70.
  Abstract Citation Links
• Report
  M. Malawski, J. Kocot, I. Ryszka, M. Bubak, M. Wieczorek, and T. Fahringer. Optimization of application execution in the GridSpace environment.
  Abstract Citation Links
• Proceedings
  M. Malawski, J. Kocot, I. Ryszka, M. Bubak, and M. Wieczorek. Optimization of application execution in the GridSpace environment. In: Integrated research in grid computing. ISBN 9789605242602. pp. 395-405.
  Citation Links
• Article
  N. T. Faber, C. M. Boily, and S. F. Portegies Zwart. On time-dependent orbital complexity in gravitational N-body simulations. Monthly Notices of the Royal Astronomical Society 386(1), pp. 425-439.
  Abstract Citation Links
• Article
  E. Gaburov, A. Gualandris, and S. Portegies Zwart. On the onset of runaway stellar collisions in dense star clusters: I. Dynamics of the first collision. Monthly Notices of the Royal Astronomical Society 384(1), pp. 376-385.
  Abstract Citation Links
• Article
  L. R. Yungelson, E. P. J. van den Heuvel, J. S. Vink, S. F. Portegies Zwart, and A. de Koter. On the evolution and fate of super-massive stars. Astronomy & Astrophysics 477(1), pp. 223-237.
  Abstract Citation Links
• Article
  B. Chopard, J.-L. Falcone, R. Razakanirina, A. Hoekstra, and A. Caiazzo. On the collision-propagation and gather-update formulations of a cellular automata rule. Lecture Notes in Computer Science 5191, pp. 144-151.
  Abstract Citation Links
• Proceedings
  B. Chopard, J.-L. Falcone, R. Razakarinina, A. G. Hoekstra, and A. Caiazzo. On the collision-propagation and gather-update formulations of a Cellular Automata rule. In: Cellular Automata, 8th International Conference on Cellular Automata for Reseach and Industry, ACRI 2008. ISBN 978-3-540-79991-7. Lecture Notes in Computer Science 5191, pp. 144-151.
  Citation
• Proceedings
  W. Funika, M. Zientarski, R. M. Badia, J. Labarta, and M. Bubak. OCM2PRV: performance visualization of Grid applications based on OCM-G and Paraver. In: Integrated research in grid computing. ISBN 9789605242602. pp. 87-98.
  Citation Links
• Proceedings
  D. J. W. Evans, A. G. Hoekstra, J. Gunn, D. Walker, D. R. Hose, R. H. Smallwood, B. Chopard, M. Krafczyk, J. M. Bernsdorf, and P. V. Lawford. Multiscale Modelling: Application of the Complex Automata Simulation Technique (COAST). In: Proceedings of the European Biomechanics Society conference 2008.
  Citation
• MSc Thesis
  L. Y. L. Muller. Multi-touch displays: design, applications and performance evaluation. Supervised by R. G. Belleman.
  Citation Links
• Article
  P. Sloot, P. Coveney, M. T. Bubak, A.-M. Vandamme, B. Ó Nualláin, D. van de Vijver, and C. Boucher. Multi-science decision support for HIV drug resistance treatment. Studies in Health Technology and Informatics 138, pp. 188-198.
  Abstract Citation Links
• Article
  A. G. Hoekstra, J.-L. Falcone, A. Caiazzo, and B. Chopard. Multi-scale modeling with cellular automata: The complex automata approach. Lecture Notes in Computer Science 5191, pp. 192-199.
  Abstract Citation Links
• Article
  B. Balis, M. Bubak, and B. Łabno. Monitoring of Grid scientific workflows. Scientific Programming 16(2-3), pp. 205-216.
  Abstract Citation Links
• Article
  J. A. Kaandorp, J. G. Blom, J. Verhoef, M. Filatov, M. Postma, and W. E. G. Müller. Modelling genetic regulation of growth and form in a branching sponge. Proceedings of the Royal Society B-Biological Sciences 275(1651), pp. 2569-2575.
  Abstract Citation Links
• MSc Thesis
  R. Quax. Modeling and Simulating the Propagation of Infectious Diseases Using Complex Networks. Supervised by David Bader.
  Citation Links
• Article
  E. Gaburov, J. C. jr. Lombardi, and S. Portegies Zwart. Mixing in massive stellar mergers. Monthly Notices of the Royal Astronomical Society. Letters 383(1), pp. L5-L9.
  Abstract Citation Links
• MSc Thesis
  A. Sottoriva. Mathematical Modeling of Tumour Growth and Invasion Using a Hybrid Cellular Automaton. Supervised by P. M. A. Sloot and L. Vermeulen.
  Citation
• Proceedings
  E. V. Zudilova-Seinstra. Making Virtual Reality Usable for Medical Specialists. In: In Book of Abstracts, D-CIS Human Factors Day. pp. 10-11.
  Citation Links
• Article
  D. Y. Orlova, M. A. Yurkin, A. G. Hoekstra, and V. P. Maltsev. Light scattering by neutrophils: Model, simulation, and experiment. Journal of Biomedical Optics 13(5), p. 054057.
  Abstract Citation Links
• Article
  B. Baliś, M. Bubak, and M. Wegiel. LGF: A flexible framework for exposing legacy codes as services. Future Generation Computer Systems 24(7), pp. 711-719.
  Abstract Citation Links
• Proceedings
  T. Bartyński, M. Malawski, and M. Bubak. Invocation of Grid operations in the ViroLab Virtual Laboratory. In: Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings. ISBN 9788391514191. pp. 59-64.
  Abstract Citation Links
• Proceedings
  T. Szepieniec and M. Bubak. Investigation of the DAG eligible jobs maximization algorithm in a grid. In: Grid 2008: proceedings of the 2008 9th IEEE/ACM International Conference on Grid Computing: September 29th-October 1st, 2008, Tsukuba, Japan. ISBN 9781424425785. pp. 340-345.
  Abstract Citation Links
• Article
  A. Belloum, Z. Zhao, and M. Bubak. International Workshop on Applications of Workflows in Computational Science (AWCS 08). Lecture Notes in Computer Science 5103, pp. 459-462.
  Abstract Citation Links
• Article
  M. Assel, P. Nowakowski, and M. Bubak. Integrating and accessing medical data resources within the ViroLab Virtual Laboratory. Lecture Notes in Computer Science 5103, pp. 90-99.
  Abstract Citation Links
• Article
  V. V. Gvaramadze, A. Gualandris, and S. Portegies Zwart. Hyperfast pulsars as the remnants of massive stars ejected from young star clusters. Monthly Notices of the Royal Astronomical Society 385(2), pp. 929-938.
  Abstract Citation Links
• Proceedings
  M. Malawski, T. Gubała, M. Kasztelnik, T. Bartynski, and M. Bubak. High-level scripting approach for building component-based applications on the Grid. In: Making grids work: Proceedings of the CoreGRID Workshop on Programming Models, Grid and P2P System Architecture, Grid Systems, Tools and Environments, 12-13 June 2007, Heraklion, Crete, Greece. ISBN 9780387784472. pp. 309-321.
  Abstract Citation Links
• Article
  R. G. Belleman, J. Bédorf, and S. F. Portegies Zwart. High performance direct gravitational N-body simulations on graphics processing units II: An implementation in CUDA. New Astronomy 13(2), pp. 103-112.
  Abstract Citation Links
• Article
  J. A. van Meel, A. Arnold, D. Frenkel, S. F. Portegies Zwart, and R. G. Belleman. Harvesting graphics power for MD simulations. Molecular Simulation 34(3), pp. 259-266.
  Abstract Citation Links
• Proceedings
  K. Rycerz, M. Bubak, and P. M. A. Sloot. HLA component model on the example of multiscale simulation. In: Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings. ISBN 9788391514191. pp. 272-275.
  Citation Links
• Report
  K. Rycerz, M. Bubak, P. M. A. Sloot, and V. Getov. HLA component based environment for distributed multiscale simulations.
  Abstract Citation Links
• Proceedings
  K. Rycerz, M. Bubak, and P. M. A. Sloot. HLA component based environment for distributed multiscale simulations. In: From grids to service and pervasive computing. ISBN 9780387094540. pp. 229-239.
  Abstract Citation Links
• Article
  H.-C. Huang, A. Konagaya, V. Lanza, and P. M. A. Sloot. Guest Editorial Introduction to the Special Section on BioGrid: Biomedical Computations on the Grid. IEEE Transactions on Information Technology in Biomedicine 12(2), pp. 133-137.
  Citation Links
• Chapter
  A. Tirado-Ramos, P. M. A. Sloot, and M. Bubak. Grid­based interactive decision support in biomedicine. In: Grid computing for bioinformatics and computational biology. ISBN 9780471784098. pp. 225-246.
  Citation Links
• Proceedings
  E. Ciepiela, J. Kocot, T. Gubala, M. Malawski, M. Kasztelnik, and M. Bubak. GridSpace Engine of the ViroLab Virtual Laboratory. In: Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings. ISBN 9788391514191. pp. 53-58.
  Abstract Citation Links
• Proceedings
  J. K. Rath, A. D. Verkerk, M. Brinza, R. E. I. Schropp, W. J. Goedheer, V. V. Krzhizhanovskaya, Y. E. Gorbachev, K. E. Orlov, E. M. Khilkevitch, and A. S. Smirnov. Gas phase considerations for the deposition of thin film silicon solar cells by VHF-PECVD at low substrate temperatures. In: Proceedings of the 33rd IEEE Photovoltaic Specialists Conference, San Diego, California. ISBN 9781424416400.
  Abstract Citation Links
• Proceedings
  J. K. Rath, A. Verkerk, M. Brinza, R. E. I. Schropp, W. J. Goedheer, V. V. Krzhizhanovskaya, Y. E. Gorbachev, K. E. Orlov, E. M. Khilkevitch, and A. S. Smirnov. Gas phase considerations for the deposition of thin film silicon cells by VHF-PECVD at low substrate temperatures. In: Proceedings of 33rd IEEE Photovoltaic Specialists Conference.
  Citation
• Proceedings
  S. Murtaza, A. G. Hoekstra, and P. M. A. Sloot. Floating point based Cellular Automata simulations using a dual FPGA-enabled system. In: 2008 Second International Workshop on High-Performance Reconfigurable Computing Technology and Applications (HPRCTA): proceedings: held in conjunction with SC 08, Austin, TX, November 17, 2008. ISBN 9781424428267.
  Abstract Citation Links
• Other: misc
  J. A. Kaandorp. Exploring Theoretical Morphospaces, Book review: The Geometry of Evolution: Adaptive Landscapes and Theoretical Morphospaces. George R. McGhee. BioScience 58, pp. 271-273.
  Citation
• Article
  A. Gualandris, S. Harfst, D. Merritt, and S. Mikkola. Evolution of stellar orbits in the galactic centre. Astronomische Nachrichten 329(9-10), pp. 1008-1011.
  Abstract Citation Links
• Article
  T. Szepieniec and M. Bubak. Evaluation of eligible jobs maximization algorithm for DAG scheduling in grids. Lecture Notes in Computer Science 5101, pp. 254-263.
  Abstract Citation Links
• Article
  A. V. Chernyshev, P. A. Tarasov, K. A. Semianov, V. M. Nekrasov, A. G. Hoekstra, and V. P. Maltsev. Erythrocyte lysis in isotonic solution of ammonium chloride: Theoretical modelling and experimental verification. Journal of Theoretical Biology 251(1), pp. 93-107.
  Abstract Citation Links
• Article
  A. Caiazzo, J. L. Falcone, B. Chopard, and A. G. Hoekstra. Error investigations in complex automata models for reaction-diffusion systems. Lecture Notes in Computer Science 5191, pp. 260-267.
  Abstract Citation Links
• Article
  W. Funika, D. Harężlak, D. Król, and M. Bubak. Environment for collaborative development and execution of Virtual Laboratory applications. Lecture Notes in Computer Science 5103, pp. 446-455.
  Abstract Citation Links
• MSc Thesis
  J. B. W. Geerdink. Entropic and multiple relaxation time lattice Boltzmann methods compared for time harmonic flows. Supervised by A. G. Hoekstra.
  Citation Links
• Proceedings
  B. Ó Nualláin, D. A. M. C. van de Vijver, C. A. B. Boucher, A. Tirado Ramos, and P. M. A. Sloot. Enhanced Decision Support for HIV Drug Resistance Interpretation. In: Proceedings of the 6th European HIV Drug Resistance Workshop.
  Citation Links
• Article
  S. L. Moll, R. de Grijs, P. Anders, P. A. Crowther, S. S. Larsen, L. J. Smith, and S. F. Portegies Zwart. Dynamical mass of a star cluster in M 83: A test of fibre-fed multi-object spectroscopy. Astronomy & Astrophysics 490(1), pp. 125-133.
  Abstract Citation Links
• Article
  Y. Demchenko, O. Mulmo, L. Gommans, C. de Laat, and A. Wan. Dynamic security context management in Grid-based applications. Future Generation Computer Systems 24(5), pp. 434-441.
  Abstract Citation Links
• Article
  K. Rycerz, M. Bubak, and P. M. A. Sloot. Dynamic interactions in HLA component model for multiscale simulations. Lecture Notes in Computer Science 5102, pp. 217-226.
  Abstract Citation Links
• Proceedings
  K. J. Rycerz, P. M. A. Sloot, and M. T. Bubak. Dynamic Interactions in HLA Component Model for Multiscale Simulations. In: Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part II. ISBN 978-3-540-69386-4. Lecture Notes in Computer Science 5102, pp. 217-226.
  Citation Links
• Article
  D. Groen, S. Portegies Zwart, S. McMillan, and J. Makino. Distributed N-body simulation on the grid using dedicated hardware. New Astronomy 13(5), pp. 348-358.
  Abstract Citation Links
• Proceedings
  M. Kasztelnik, T. Gubała, M. Malawski, and M. Bubak. Development and execution of collaborative application on the ViroLab virtual laboratory. In: Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings. ISBN 9788391514191. pp. 41-46.
  Abstract Citation Links
• Book
  M. Bubak, M. Turała, and K. Wiatr. Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings. ISBN 9788391514191.
  Citation Links
• Book
  M. Bubak, G. D. van Albada, J. Dongarra, and P. M. A. Sloot. Computational science - ICCS 2008: 8th international conference, Kraków, Poland, June 23-25, 2008: Proceedings, part III. ISBN 9783540693888.
  Abstract Citation Links
• Book
  M. Bubak, G. D. van Albada, J. Dongarra, and P. M. A. Sloot. Computational science - ICCS 2008: 8th international conference, Kraków, Poland, June 23-25, 2008: Proceedings, part II. ISBN 9783540693864.
  Abstract Citation Links
• Book
  M. Bubak, G. D. van Albada, J. Dongarra, and P. M. A. Sloot. Computational science - ICCS 2008: 8th international conference, Kraków, Poland, June 23-25, 2008: Proceedings, part I. ISBN 9783540693833.
  Abstract Citation Links
• Article
  C. H. Liu, A. K. Satoh, M. Postma, J. Huang, D. F. Ready, and R. C. Hardie. Ca2+-dependent metarhodopsin inactivation mediated by calmodulin and NINAC myosin III. Neuron 59(5), pp. 778-789.
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