-
Proceedings
H. Spreeuw, S. Madougou, R. van Haren, B. Weel, A. Belloum, and J. Maassen.
Unlocking the LOFAR ITA.
In: IEEE 15th International Conference on eScience.
ISBN 9781728124513.
pp. 467-470.
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Article
S. Alowayyed, M. Vassaux, B. Czaja, P. V. Coveney, and A. G. Hoekstra.
Towards heterogeneous multi-scale computing on large scale parallel supercomputers.
Supercomputing Frontiers and Innovations
6(4), pp. 20-43.
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Article
V. Karbovskii, O. Severiukhina, I. Derevitskii, D. Voloshin, A. Presbitero, and M. Lees.
The impact of different obstacles on crowd dynamics.
Journal of Computational Science
36, 100893.
-
PhD Thesis
V. Sheraton Muniraj.
The emergence of biofilms.
Supervised by
P. M. A. Sloot.
-
Chapter
A. Pérez de Alba Ortíz, J. Vreede, and B. Ensing.
The Adaptive Path Collective Variable: A Versatile Biasing Approach to Compute the Average Transition Path and Free Energy of Molecular Transitions.
In: Biomolecular Simulations.
ISBN 9781493996087.
p. 255–290.
-
Article
I. Vermeulen, J. R. Helmus, M. Lees, and R. van den Hoed.
Simulation of future electric vehicle charging behavior—effects of transition from PHEV to FEV.
World Electric Vehicle Journal
10(2), 42.
-
Article
V. Sivadasan, E. Lorenz, A. G. Hoekstra, and D. Bonn.
Shear thickening of dense suspensions: The role of friction.
Physics of Fluids
31(10), 103103.
-
Article
A. Nikishova and A. G. Hoekstra.
Semi-intrusive uncertainty propagation for multiscale models.
Journal of Computational Science
35, pp. 80-90.
-
Article
A. Nikishova, L. Veen, P. Zun, and A. G. Hoekstra.
Semi-intrusive multiscale metamodelling uncertainty quantification with application to a model of in-stent restenosis.
Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences
377(2142), 2018154.
-
Article
-
Article
I. Anagnostou and D. Kandhai.
Risk Factor Evolution for Counterparty Credit Risk under a Hidden Markov Model.
Risks
7(2), 66.
-
Article
G. Závodszky, B. van Rooij, B. Czaja, V. Azizi, D. de Kanter, and A. G. Hoekstra.
Red blood cell and platelet diffusivity and margination in the presence of cross-stream gradients in blood flows.
Physics of Fluids
31(3), 031903.
-
Chapter
F. Castiglione, E. Mancini, M. Pedicini, and A. S. Jarrah.
Quantitative Modelling Approaches.
In: Encyclopedia of Bioinformatics and Computational Biology.
ISBN 9780128114322.
2, pp. 874-883.
-
Proceedings
-
Article
M. V. Sheraton, V. R. Melnikov, and P. M. A. Sloot.
Prediction and quantification of bacterial biofilm detachment using Glazier-Graner–Hogeweg method based model simulations.
Journal of Theoretical Biology
482, 109994.
-
Article
S. Alowayyed, T. Piontek, J. L. Suter, O. Hoenen, D. Groen, O. Luk, B. Bosak, P. Kopta, K. Kurowski, O. Perks, K. Brabazon, V. Jancauskas, D. Coster, P. V. Coveney, and A. G. Hoekstra.
Patterns for High Performance Multiscale Computing.
Future Generation Computer Systems
91, pp. 335-346.
-
Proceedings
V. Azizi Tarksalooyeh, G. Závodszky, and A. G. Hoekstra.
Optimizing Parallel Performance of the Cell Based Blood Flow Simulation Software HemoCell.
In:
Computational Science – ICCS 2019.
ISBN
9783030227449.
III, pp. 537-547.
-
Article
A. G. Hoekstra, S. Portegies Zwart, and P. V. Coveney.
Multiscale modelling, simulation and computing: from the desktop to the exascale.
Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences
377(2142), 20180355.
-
Article
A. G. Hoekstra, B. Chopard, D. Coster, S. Portegies Zwart, and P. V. Coveney.
Multiscale computing for science and engineering in the era of exascale performance.
Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences
377(2142), 20180144.
-
Article
P. Berg, S. Voß, G. Janiga, S. Saalfeld, A. W. Bergersen, K. Valen-Sendstad, J. Bruening, L. Goubergrits, A. Spuler, T. L. Chiu, A. C. O. Tsang, G. Copelli, B. Csippa, G. Paál, G. Závodszky, F. J. Detmer, B. J. Chung, J. R. Cebral, S. Fujimura, H. Takao, C. Karmonik, S. Elias, N. M. Cancelliere, M. Najafi, D. A. Steinman, V. M. Pereira, S. Piskin, E. A. Finol, M. Pravdivtseva, P. Velvaluri, H. Rajabzadeh-Oghaz, N. Paliwal, H. Meng, S. Seshadhri, S. Venguru, M. Shojima, S. Sindeev, S. Frolov, Y. Qian, Y.-A. Wu, K. D. Carlson, D. F. Kallmes, D. Dragomir-Daescu, and O. Beuing.
Multiple Aneurysms AnaTomy CHallenge 2018 (MATCH)—phase II: rupture risk assessment.
International Journal of Computer Assisted Radiology and Surgery
14(10), p. 1795–1804.
-
Article
W. R. J. Vermeulen, D. Roy, and R. Quax.
Modelling the Influence of Regional Identity on Human Migration.
Urban Science
3(3), 78.
-
Article
V. Prana, P. Tieri, M. C. Palumbo, E. Mancini, and F. Castiglione.
Modeling the effect of high calorie diet on the interplay between adipose tissue, inflammation and diabetes.
Computational and Mathematical Methods in Medicine
2019, 7525834.
-
Proceedings
S. Shakeri, V. Maccatrozzo, L. Veen, R. Bakhshi, L. Gommans, C. de Laat, and P. Grosso.
Modeling and matching digital data marketplace policies.
In: IEEE 15th International Conference on eScience.
ISBN 9781728124513.
pp. 570-577.
-
Article
Z. Huang, E. Lum, G. Jimenez, M. Semwal, P. Sloot, and J. Car.
Medication management support in diabetes: a systematic assessment of diabetes self-management apps.
BMC Medicine
17, 127.
-
Article
E. Caroselli, F. Gizzi, F. Prada, C. Marchini, V. Airi, J. Kaandorp, G. Falini, Z. Dubinsky, and S. Goffredo.
Low and variable pH decreases recruitment efficiency in populations of a temperate coral naturally present at CO2 vent.
Limnology and Oceanography
64(3), pp. 1059-1069.
-
Article
P. S. Zun, A. J. Narracott, C. Chiastra, J. Gunn, and A. G. Hoekstra.
Location-Specific Comparison Between a 3D In-Stent Restenosis Model and Micro-CT and Histology Data from Porcine In Vivo Experiments.
Cardiovascular Engineering and Technology
10(4), p. 568–582.
-
Proceedings
Benjamin Kolb, Leon Lang, Henning Bartsch, Arwin Gansekoele, Raymond Koopmanschap, Leonardo Romor, David Speck, Mathijs Mul, and Elia Bruni.
Learning to request guidance in emergent communication.
In: Proceedings of the Beyond Vision and LANguage.
ISBN 9781950737758.
pp. 41-50.
-
Proceedings
D. Groen, R. A. Richardson, D. W. Wright, V. Jancauskas, R. Sinclair, P. Karlshoefer, M. Vassaux, H. Arabnejad, T. Piontek, P. Kopta, B. Bosak, J. Lakhlili, O. Hoenen, D. Suleimenova, W. Edeling, D. Crommelin, A. Nikishova, and P. V. Coveney.
Introducing VECMAtk - Verification, Validation and Uncertainty Quantification for Multiscale and HPC Simulations.
In:
Computational Science – ICCS 2019 .
ISBN
9783030227470.
IV, pp. 479-492.
-
Article
J. Runge, S. Bathiany, E. Bollt, G. Camps-Valls, D. Coumou, E. Deyle, C. Glymour, M. Kretschmer, M. D. Mahecha, J. Muñoz-Marí, E. H. van Nes, J. Peters, R. Quax, M. Reichstein, M. Scheffer, B. Schölkopf, P. Spirtes, G. Sugihara, J. Sun, K. Zhang, and J. Zscheischler.
Inferring causation from time series in Earth system sciences.
Nature Communications
10, 2553.
-
Article
E. Ranguelova, B. Weel, D. Roy, M. Kuffer, K. Pfeffer, and M. Lees.
Image Based Classification of Slums, Built-Up and Non-Built-Up Areas in Kalyan and Bangalore, India.
European Journal of Remote Sensing
52(S1), pp. 40-61.
-
Article
B. J. M. van Rooij, G. Závodszky, V. W. Azizi Tarksalooyeh, and A. G. Hoekstra.
Identifying the start of a platelet aggregate by the shear rate and the cell-depleted layer.
Journal of the Royal Society Interface
16(159), 20190148.
-
Article
A. Presbitero, E. Mancini, F. Castiglione, V. V. Krzhizhanovskaya, and R. Quax.
Game of neutrophils: modeling the balance between apoptosis and necrosis.
BMC Bioinformatics
20(Supplement 6), 475.
-
Article
E. Weinans, J. J. Lever, S. Bathiany, R. Quax, J. Bascompte, E. H. van Nes, M. Scheffer, and I. A. van de Leemput.
Finding the direction of lowest resilience in multivariate complex systems.
Journal of the Royal Society Interface
16(159), 20190629.
-
Article
Olivia Chu, V. V. Vasconcelos, and Corina Tarnita.
Evolutionary Dynamics in a Group Population Structure with Barriers to Group Entry.
APS Meeting Abstracts
64(2), B63.00008.
-
Article
S. Georgievska, P. Rutten, J. Amoraal, E. Ranguelova, R. Bakhshi, B. L. de Vries, M. Lees, and S. Klous.
Detecting high indoor crowd density with Wi-Fi localization: a statistical mechanics approach.
Journal of Big Data
6, 31.
-
Article
J. Wang, M. Kuffer, D. Roy, and K. Pfeffer.
Deprivation pockets through the lens of convolutional neural networks.
Remote Sensing of the Environment
234, 111448.
-
Article
M. G. M. Olde Rikkert, P. P. M. van Zuijlen, M. de Kleuver, A. van Reekum, A. G. Hoekstra, and P. M. A. Sloot.
Complexiteit van ziekten.
Nederlands Tijdschrift voor Geneeskunde
163(35), D3970.
-
Chapter
G. Moysiadis, I. Anagnostou, and D. Kandhai.
Calibrating the Mean-Reversion Parameter in the Hull-White Model Using Neural Networks.
In:
ECML PKDD 2018 Workshops.
ISBN
9783030134631.
pp. 23-36.
-
Article
P. Dutta, L. Ma, Y. Ali, P. M. A. Sloot, and J. Zheng.
Boolean network modeling of β-cell apoptosis and insulin resistance in type 2 diabetes mellitus.
BMC Systems Biology
13(Supplement 2), 36.
-
Proceedings
K. van der Zwet, A. I. Barros, T. M. van Engers, and B. van der Vecht.
An agent-based model for emergent opponent behavior.
In: Computational Science – ICCS 2019.
ISBN 9783030227418.
II, pp. 290-303.
-
Article
Z. Huang, E. Tan, E. Lum, P. Sloot, B. O. Boehm, and J. Car.
A Smartphone App to Improve Medication Adherence in Patients With Type 2 Diabetes in Asia.
JMIR mHealth and uHealth
7(9), e14914.
-
PhD Thesis
P. Zun.
3D modelling of in-stent restenosis.
Supervised by
A. G. Hoekstra, A. V. Boukhanovsky, and A. Svitenkov.