Publications of the CSL group

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2022

• Article
  I. Kleinwächter, B. Mohr, A. Joppe, N. Hellmann, T. Bereau, H. D. Osiewacz, and D. Schneider. CLiB - a novel cardiolipin-binder isolated via data-driven and in vitro screening. RSC Chemical Biology 3(7), pp. 941-954.
  Abstract Citation Links
• Article
  D. Wangpraseurt, Y. Sun, S. You, S.-T. Chua, S. K. Noel, H. F. Willard, D. B. Berry, A. M. Clifford, S. Plummer, Y. Xiang, H. H. Hwang, J. Kaandorp, J. M. Diaz, T. C. La Jeunesse, M. Pernice, S. Vignolini, M. Tresguerres, and S. Chen. Bioprinted Living Coral Microenvironments Mimicking Coral‐Algal Symbiosis. Advanced Functional Materials 32(35), 2202273.
  Abstract Citation Links
• Article
  V. R. Melnikov, G. I. Christopoulos, V. V. Krzhizhanovskaya, M. H. Lees, and P. M. A. Sloot. Behavioural thermal regulation explains pedestrian path choices in hot urban environments. Scientific Reports 12, 2441.
  Abstract Citation Links
• Article
  J. van der Velden, F. W. Asselbergs, J. Bakkers, S. Batkai, L. Bertrand, C. R. Bezzina, I. Bot, B. J. J. M. Brundel, L. Carrier, S. Chamuleau, M. Ciccarelli, D. Dawson, S. M. Davidson, A. Dendorfer, D. J. Duncker, T. Eschenhagen, L. Fabritz, I. Falcão-Pires, P. Ferdinandy, M. Giacca, H. Girao, C. Gollmann-Tepeköylü, M. Gyongyosi, T. J. Guzik, N. Hamdani, S. Heymans, A. Hilfiker, D. Hilfiker-Kleiner, A. G. Hoekstra, J.-S. Hulot, D. W. D. Kuster, L. W. van Laake, S. Lecour, T. Leiner, W. A. Linke, J. Lumens, E. Lutgens, R. Madonna, L. Maegdefessel, M. Mayr, P. van der Meer, R. Passier, F. Perbellini, C. Perrino, M. Pesce, S. Priori, C. A. Remme, B. Rosenhahn, U. Schotten, R. Schulz, K. R. Sipido, J. P. G. Sluijter, F. van Steenbeek, S. Steffens, C. M. Terracciano, C. G. Tocchetti, P. Vlasman, K. K. Yeung, S. Zacchigna, D. Zwaagman, and T. Thum. Animal models and animal-free innovations for cardiovascular research: current status and routes to be explored. Consensus document of the ESC Working Group on Myocardial Function and the ESC Working Group on Cellular Biology of the Heart. Cardiovascular research 118(15), pp. 3016-3051.
  Abstract Citation Links
• Article
  J. R. Helmus, M. H. Lees, and R. van den Hoed. A validated agent-based model for stress testing charging infrastructure utilization. Transportation Research Part A - Policy and Practice 159, pp. 237-262.
  Abstract Citation Links
• Article
  M. W. J. van den Ende, S. Epskamp, M. H. Lees, H. L. J. van der Maas, R. W. Wiers, and P. M. A. Sloot. A review of mathematical modeling of addiction regarding both (neuro-) psychological processes and the social contagion perspectives. Addictive Behaviors 127, 107201.
  Abstract Citation Links
• Article
  K. den Nijs, J. Edivaldo, B. D. L. Châtel, J. F. Uleman, M. Olde Rikkert, H. Wertheim, and R. Quax. A Global Sharing Mechanism of Resources. International Journal of Environmental Research and Public Health 19(10), 5930.
  Abstract Citation Links

2021

• Proceedings
  M. van der Kolk, C. Miller, R. Padmos, V. Azizi, and A. Hoekstra. des-ist: A Simulation Framework to Streamline Event-Based In Silico Trials. In: Computational Science – ICCS 2021. ISBN 9783030779672. III, pp. 648-654.
  Abstract Citation Links
• Article
  D. Groen, H. Arabnejad, V. Jancauskas, W. N. Edeling, F. Jansson, R. A. Richardson, J. Lakhlili, L. Veen, B. Bosak, P. Kopta, D. W. Wright, N. Monnier, P. Karlshoefer, D. Suleimenova, R. Sinclair, M. Vassaux, A. Nikishova, M. Bieniek, O. O. Luk, M. Kulczewski, E. Raffin, D. Crommelin, O. Hoenen, D. P. Coster, and P. V. Coveney. VECMAtk: a scalable verification, validation and uncertainty quantification toolkit for scientific simulations. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences 379(2197), 20200221.
  Abstract Citation Links
• Article
  L. Crielaard, M. Nicolaou, A. Sawyer, R. Quax, and K. Stronks. Understanding the impact of exposure to adverse socioeconomic conditions on chronic stress from a complexity science perspective. BMC Medicine 19, 242.
  Abstract Citation Links
• Article
  D. Ye, L. Veen, A. Nikishova, J. Lakhlili, W. Edeling, O. O. Luk, V. V. Krzhizhanovskaya, and A. G. Hoekstra. Uncertainty quantification patterns for multiscale models. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences 379(2197), 20200072.
  Abstract Citation Links
• Proceedings
  C. Miller, M. van der Kolk, R. Padmos, T. Józsa, and A. Hoekstra. Uncertainty Quantification of Coupled 1D Arterial Blood Flow and 3D Tissue Perfusion Models Using the INSIST Framework. In: Computational Science – ICCS 2021. ISBN 9783030779801. VI, pp. 691-697.
  Abstract Citation Links
• Article
  S. Achterhof and J. M. Meylahn. Two-community noisy Kuramoto model with general interaction strengths. II. Chaos 31(3), 033116.
  Abstract Citation Links
• Article
  S. Achterhof and J. M. Meylahn. Two-community noisy Kuramoto model with general interaction strengths. I. Chaos 31(3), 033115.
  Abstract Citation Links
• Proceedings
  R. M. Padmos, T. I. Józsa, W. K. El-Bouri, G. Závodszky, S. J. Payne, and A. G. Hoekstra. Two-Way Coupling Between 1D Blood Flow and 3D Tissue Perfusion Models. In: Computational Science – ICCS 2021. ISBN 9783030779672. III, pp. 670-683.
  Abstract Citation Links
• Article
  D. Suleimenova, H. Arabnejad, W. N. Edeling, D. Coster, O. O. Luk, J. Lakhlili, V. Jancauskas, M. Kulczewski, L. Veen, D. Ye, P. Zun, V. Krzhizhanovskaya, A. Hoekstra, D. Crommelin, P. V. Coveney, and D. Groen. Tutorial applications for Verification, Validation and Uncertainty Quantification using VECMA toolkit. Journal of Computational Science 53, 101402.
  Abstract Citation Links
• Article
  J. Nevin, M. Lees, and P. Groth. The non-linear impact of data handling on network diffusion models. Patterns 2(12), 100397.
  Abstract Citation Links
• Article
  A. Gheorghiu, P. V. Coveney, and A. A. Arabi. The influence of external electric fields on proton transfer tautomerism in the guanine-cytosine base pair. Physical Chemistry Chemical Physics 23(10), pp. 6252-6265.
  Abstract Citation Links
• Article
  W. Edeling, H. Arabnejad, R. Sinclair, D. Suleimenova, K. Gopalakrishnan, B. Bosak, D. Groen, I. Mahmood, D. Crommelin, and P. V. Coveney. The impact of uncertainty on predictions of the CovidSim epidemiological code. Nature Computational Science 1(2), pp. 128-135.
  Abstract Citation Links
• Article
  C. J. Spieker, G. Závodszky, C. Mouriaux, M. van der Kolk, C. Gachet, P. H. Mangin, and A. G. Hoekstra. The Effects of Micro-vessel Curvature Induced Elongational Flows on Platelet Adhesion. Annals of Biomedical Engineering 49(12), p. 3609–3620.
  Abstract Citation Links
• Article
  I. S. Kleinwächter, S. Pannwitt, A. Centi, N. Hellmann, E. Thines, T. Bereau, and D. Schneider. The Bacteriostatic Activity of 2-Phenylethanol Derivatives Correlates with Membrane Binding Affinity. Membranes 11(4), 254.
  Abstract Citation Links
• Report
  Leesa Quinlan, Martin Reeves, David Purser, Simon Levin, and V. V. Vasconcelos. Strategies of Change.
  Citation Links
• Article
  P. Rutten, M. H. Lees, S. Klous, and P. M. A. Sloot. State-space models reveal bursty movement behaviour of dance event visitors. EPJ Data Science 10, 35.
  Abstract Citation Links
• Article
  J. Bruggeman, R. Sprik, and R. Quax. Spontaneous cooperation for public goods. Journal of Mathematical Sociology 45(3), pp. 183-191.
  Abstract Citation Links
• Article
  V. V. Vasconcelos, S. M. Constantino, A. Dannenberg, M. Lumkowsky, E. Weber, and S. Levin. Segregation and clustering of preferences erode socially beneficial coordination. Proceedings of the National Academy of Sciences of the United States of America 118(50), e2102153118.
  Abstract Citation Links
• Article
  M. Bause and T. Bereau. Reweighting non-equilibrium steady-state dynamics along collective variables. Journal of Chemical Physics 154(13), 134105.
  Abstract Citation Links
• Proceedings
  Shannon Fase, Andre Kruglyakov, Emoke Takács, and A. W. Abcouwer. Rethinking Value - value circuit in a Circular Economy. In: 37th EBES Conference Proceedings. 37-II, pp. 1115-1128.
  Abstract Citation
• Article
  P. V. Coveney, D. Groen, and A. G. Hoekstra. Reliability and reproducibility in computational science: implementing validation, verification and uncertainty quantification in silico. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences 379(2197), 20200409.
  Citation Links
• Article
  T. Georgakopoulou, A.-E. van der Wijk, E. N. T. P. Bakker, E. vanBavel, A. Hoekstra, R. Padmos, V. Azizi, C. Miller, and M. van der Kolk. Quantitative 3D analysis of tissue damage in a rat model of microembolization. Journal of Biomechanics 128, 110723.
  Abstract Citation Links
• Article
  J. L. Suter and P. V. Coveney. Principles governing control of aggregation and dispersion of aqueous graphene oxide. Scientific Reports 11, 22460.
  Abstract Citation Links
• Proceedings
  M. Paszynski, D. Kranzlmüller, V. V. Krzhizhanovskaya, J. J. Dongarra, and P. M. A. Sloot. Preface. In: Computational Science – ICCS 2021. ISBN 9783030779672. III, pp. v-vi.
  Citation Links
• Proceedings
  M. Paszynski, D. Kranzlmüller, V. V. Krzhizhanovskaya, J. J. Dongarra, and P. M. A. Sloot. Preface. In: Computational Science – ICCS 2021. ISBN 9783030779610. I, pp. v-vi.
  Citation Links
• Proceedings
  M. Paszynski, D. Kranzlmüller, V. V. Krzhizhanovskaya, J. J. Dongarra, and P. M. A. Sloot. Preface. In: Computational Science – ICCS 2021. ISBN 9783030779702. IV, pp. v-vi.
  Citation Links
• Proceedings
  M. Paszynski, D. Kranzlmüller, V. V. Krzhizhanovskaya, J. J. Dongarra, and P. M. A. Sloot. Preface. In: Computational Science – ICCS 2021. ISBN 9783030779641. II, pp. v-vi.
  Citation Links
• Proceedings
  M. Paszynski, D. Kranzlmüller, V. V. Krzhizhanovskaya, J. J. Dongarra, and P. M. A. Sloot. Preface. In: Computational Science – ICCS 2021. ISBN 9783030779801. VI, pp. v-vi.
  Citation Links
• Proceedings
  M. Paszynski, D. Kranzlmüller, V. V. Krzhizhanovskaya, J. J. Dongarra, and P. M. A. Sloot. Preface. In: Computational Science – ICCS 2021. ISBN 9783030779771. V, pp. v-vi.
  Citation Links
• Proceedings
  S. Koek, E. Takács, and A. W. Abcouwer. Personal Commitment and performance improvement : a new evaluation. In: Proceedings of the 2021 SIGED International Conference on Information Systems Education and Research. ISBN 9781734312324. pp. 237-248.
  Abstract Citation
• Proceedings
  M. Meijering, T. Abcouwer, and E. Takács. Overcoming the Traps in the Adaptive Cycle of Resilience Model. In: Eurasian Business and Economics Perspectives. ISBN 9783030853044. pp. 59-83.
  Abstract Citation Links
• Article
  T. I. Józsa, R. M. Padmos, W. K. El-Bouri, A. G. Hoekstra, and S. J. Payne. On the Sensitivity Analysis of Porous Finite Element Models for Cerebral Perfusion Estimation. Annals of Biomedical Engineering 49(12), p. 3647–3665.
  Abstract Citation Links
• Article
  D. Ye, A. Nikishova, L. Veen, P. Zun, and A. G. Hoekstra. Non-intrusive and semi-intrusive uncertainty quantification of a multiscale in-stent restenosis model. Reliability Engineering & System Safety 214, 107734.
  Abstract Citation Links
• Article
  G. Buiten, C. Diks, A. Faber, E. Heemskerk, C. Mattsson, F. Takes, and P. Sloot. Netwerkanalyse biedt nieuwe inzichten voor clustergericht energiebeleid. Economisch-Statistische Berichten 106(4804), pp. 586-588.
  Abstract Citation Links
• Article
  P. Mondal, P.-A. Cazade, A. K. Das, T. Bereau, and M. Meuwly. Multipolar Force Fields for Amide-I Spectroscopy from Conformational Dynamics of the Alanine Trimer. The journal of Physical Chemistry. B 125(39), pp. 10928-10938.
  Abstract Citation Links
• Article
  R. M. Padmos, N. Arrarte Terreros, T. I. Józsa, G. Závodszky, H. A. Marquering, C. B. L. M. Majoie, and A. G. Hoekstra. Modelling the leptomeningeal collateral circulation during acute ischaemic stroke. Medical Engineering & Physics 91, pp. 1-11.
  Abstract Citation Links
• PhD Thesis
  M. Bause. Maximum caliber approach to reweight dynamics of non-equilibrium steady states. Supervised by T. Bereau and E. J. Meijer.
  Abstract Citation Links
• Article
  J. F. Uleman, R. J. F. Melis, R. Quax, E. A. van der Zee, D. Thijssen, M. Dresler, O. van de Rest, I. F. van der Velpen, H. H. H. Adams, B. Schmand, I. M. C. M. de Kok, J. de Bresser, E. Richard, M. Verbeek, A. G. Hoekstra, E. A. J. A. Rouwette, and M. G. M. Olde Rikkert. Mapping the multicausality of Alzheimer’s disease through group model building. GeroScience 43(2), p. 829–843.
  Abstract Citation Links
• Proceedings
  Emoke Takács, A. W. Abcouwer, and Robin de Boer. Management and Leadership Skills and Attitude in Uncertainty. In: Proceedings of the 17th European Conference on Management, Leadership and Governance. ISBN 9781914587214. pp. 401-410.
  Abstract Citation
• Article
  P. Rutten, M. H. Lees, S. Klous, and P. M. A. Sloot. Intermittent and persistent movement patterns of dance event visitors in large sporting venues. Physica A : Statistical Mechanics and its Applications 563, 125448.
  Abstract Citation Links
• Article
  Martin Girard and Tristan Bereau. Insights into Regulation of Cell Membranes through Regulated Ensembles. Biophysical Journal 120(3, Supplement 1), p. 5A.
  Citation Links
• Article
  Tristan Bereau. Inserting Small Molecules Across Membrane Mixtures: Insight from the Potential of Mean Force. Biophysical Journal 120(3, Supplement 1), p. 10A.
  Citation Links
• Proceedings
  A. W. Abcouwer, Emoke Takács, and Csilla Rácz. Innovating Management and Leadership in Contemporary Times: Motivation and Evaluation in Learning. In: Proceedings of the 17th European Conference on Management, Leadership and Governance. ISBN 9781914587214. pp. 1-11.
  Abstract Citation
• Article
  P. Dutta, R. Quax, L. Crielaard, L. Badiali, and P. M. A. Sloot. Inferring temporal dynamics from cross-sectional data using Langevin dynamics. Royal Society Open Science 8(11), 211374.
  Abstract Citation Links
• Article
  C. Miller, R. M. Padmos, M. van der Kolk, T. I. Józsa, N. Samuels, Y. Xue, S. J. Payne, and A. G. Hoekstra. In silico trials for treatment of acute ischemic stroke: Design and implementation. Computers in Biology and Medicine 137, 104802.
  Abstract Citation Links
• Article
  I. C. A. Scherpbier, M. E. Abrahamse, R. G. Belleman, A. Popma, and R. J. L. Lindauer. Implementation of Virtual Reality to Parent-Child Interaction Therapy for Enhancement of Positive Parenting Skills: The Study Protocol for Single-Case Experimental Design with Multiple Baselines.
  Abstract Citation Links
• Proceedings
  Youssef Assal, Emoke Takacs, and A. W. Abcouwer. INFORMATION OR COMPLICATION?. In: 37th EBES Conference Proceedings. 37-II, pp. 1249-1261.
  Abstract Citation
• Article
  J. W. S. McCullough and P. V. Coveney. High fidelity blood flow in a patient-specific arteriovenous fistula. Scientific Reports 11, 22301.
  Abstract Citation Links
• Article
  B. J. M. van Rooij, G. Závodszky, A. G. Hoekstra, and D. N. Ku. Haemodynamic flow conditions at the initiation of high-shear platelet aggregation: a combined in vitro and cellular in silico study. Interface Focus 11(1), 20190126.
  Abstract Citation Links
• Article
  C. E. S. Mattsson, F. W. Takes, E. M. Heemskerk, C. Diks, G. Buiten, A. Faber, and P. M. A. Sloot. Functional Structure in Production Networks. Frontiers in Big Data 4, 666712.
  Abstract Citation Links
• Article
  M. Girard and T. Bereau. Finite-size transitions in complex membranes. Biophysical Journal 120(12), pp. 2436-2443.
  Abstract Citation Links
• Article
  T. Abcouwer, E. Takács, and J. Solymosy. Fine-tuning the Evaluation Focus in the University Cooperative Learning Model in Relation to the Pandemic. Communications of the Association for Information Systems 48, 25.
  Abstract Citation Links
• Article
  E. Weinans, R. Quax, E. H. van Nes, and I. A. van de Leemput. Evaluating the performance of multivariate indicators of resilience loss. Scientific Reports 11, 9148.
  Abstract Citation Links
• Article
  J. Kwak, M. H. Lees, W. Cai, A. R. Pourghaderi, and M. E. H. Ong. Estimating horizontal movement performance of patient beds and the impact on emergency evacuation time. Safety Science 134, 105038.
  Abstract Citation Links
• Article
  V. Karbovskii, M. Lees, A. Presbitero, A. Kurilkin, D. Voloshin, I. Derevitskii, A. Karsakov, and P. M. A. Sloot. Ensemble learning for large-scale crowd flow prediction. Engineering Applications of Artificial Intelligence 106, 104469.
  Abstract Citation Links
• Article
  P. Zun, A. Svitenkov, and A. Hoekstra. Effects of local coronary blood flow dynamics on the predictions of a model of in-stent restenosis. Journal of Biomechanics 120, 110361.
  Abstract Citation Links
• Proceedings
  T. Schilstra, E. Takács, and T. Abcouwer. Ecosystem Approach to life-long learning. In: Proceedings of the 2021 SIGED International Conference on Information Systems Education and Research. ISBN 9781734312324.
  Abstract Citation Links
• Article
  J. F. Rudzinski, S. Kloth, S. Wörner, T. Pal, K. Kremer, T. Bereau, and M. Vogel. Dynamical properties across different coarse-grained models for ionic liquids. Journal of Physics-Condensed Matter 33(22), 224001.
  Abstract Citation Links
• Proceedings
  D. Knol, F. de Leeuw, J. F. Meirink, and V. V. Krzhizhanovskaya. Deep Learning for Solar Irradiance Nowcasting: A Comparison of a Recurrent Neural Network and Two Traditional Methods. In: Computational Science – ICCS 2021. ISBN 9783030779771. V, pp. 309-322.
  Abstract Citation Links
• Article
  A. Dutta, J. Vreeken, L. M. Ghiringhelli, and T. Bereau. Data-driven equation for drug-membrane permeability across drugs and membranes. Journal of Chemical Physics 154(24), 244114.
  Abstract Citation Links
• Article
  R. M. Padmos, T. I. Józsa, W. K. El-Bouri, P. R. Konduri, S. J. Payne, and A. G. Hoekstra. Coupling one-dimensional arterial blood flow to three-dimensional tissue perfusion models for in silico trials of acute ischaemic stroke. Interface Focus 11(1), 20190125.
  Abstract Citation Links
• Article
  S. C. Lodestijn, T. van den Bosch, L. E. Nijman, L. F. Moreno, S. Schlingemann, V. M. Sheraton, S. M. van Neerven, J. J. Koning, F. A. Vieira Braga, N. J. Paauw, M. C. Lecca, K. J. Lenos, E. Morissey, D. M. Miedema, D. J. Winton, M. F. Bijlsma, and L. Vermeulen. Continuous clonal labeling reveals uniform progenitor potential in the adult exocrine pancreas. Cell Stem Cell 28(11), pp. 2009-2019.e4.
  Abstract Citation Links
• Article
  M. Girard and T. Bereau. Computer simulations of lipid regulation by molecular semigrand canonical ensembles. Biophysical Journal 120(12), pp. 2370-2373.
  Abstract Citation Links
• PhD Thesis
  V. Melnikov. Computational models of human response to urban heat. Supervised by P. M. A. Sloot, V. Krzhizhanovskaya, and M. H. Lees.
  Abstract Citation Links
• Article
  T. Bereau. Computational compound screening of biomolecules and soft materials by molecular simulations. Modelling and Simulation in Materials Science and Engineering 29(2), 023001.
  Abstract Citation Links
• Article
  P. V. Coveney, A. Hoekstra, B. Rodriguez, and M. Viceconti. Computational biomedicine. Part II. Interface Focus 11(1), 20200082.
  Citation Links
• Article
  W. Sun, L. Liu, X. Chen, A. Szolnoki, and V. V. Vasconcelos. Combination of institutional incentives for cooperative governance of risky commons. iScience 24(8), 102844.
  Abstract Citation Links
• Article
  V. Vasconcelos and F. Santos. Biased perceptions explain collective action deadlocks and suggest new mechanisms to prompt cooperation. Authors Vítor Vasconcelos and Fernando Santos on the article. IAS Review 2, 2.2.
  Citation Links
• Article
  F. P. Santos, S. A. Levin, and V. V. Vasconcelos. Biased perceptions explain collective action deadlocks and suggest new mechanisms to prompt cooperation. iScience 24(4), 102375.
  Abstract Citation Links
• Article
  Yasemin Bozkurt Varolgunes, Tristan Bereau, and Joseph F. Rudzinski. Automated Identification of Collective Variables and Metastable States from Molecular Dynamics Data. Biophysical Journal 120(3, Supplement 1), p. 79A.
  Citation
• Article
  G. Luraghi, S. Bridio, C. Miller, A. Hoekstra, J. F. Rodriguez Matas, and F. Migliavacca. Applicability analysis to evaluate credibility of an in silico thrombectomy procedure. Journal of Biomechanics 126, 110631.
  Abstract Citation Links
• Article
  J. F. Uleman, R. Quax, R. J. F. Melis, A. Hoekstra, and M. G. M. Olde Rikkert. An individualized systems model to optimize Alzheimer’s disease prevention strategies. Alzheimer's & Dementia 17(S10), e050885.
  Abstract Citation Links
• Article
  J. W. S. McCullough and P. V. Coveney. An efficient, localised approach for the simulation of elastic blood vessels using the lattice Boltzmann method. Scientific Reports 11, 24260.
  Abstract Citation Links
• Article
  S. Ghaffarian, D. Roy, T. Filatova, and N. Kerle. Agent-based modelling of post-disaster recovery with remote sensing data. International Journal of Disaster Risk Reduction .
  Abstract Citation Links
• Article
  M. Stieffenhofer, T. Bereau, and M. Wand. Adversarial reverse mapping of condensed-phase molecular structures: Chemical transferability. APL Materials 9(3), 031107.
  Abstract Citation Links
• Article
  J. van der Wal, C. D. van Borkulo, M. K. Deserno, J. J. F. Breedvelt, M. Lees, J. C. Lokman, D. Borsboom, D. Denys, R. J. van Holst, M. P. Smidt, K. Stronks, P. J. Lucassen, J. C. M. van Weert, P. M. A. Sloot, C. L. Bockting, and R. W. Wiers. Advancing urban mental health research: from complexity science to actionable targets for intervention. The Lancet. Psychiatry 8(11), pp. 991-1000.
  Abstract Citation Links
• Article
  V. A. Karatayev, V. V. Vasconcelos, A.-S. Lafuite, S. A. Levin, C. T. Bauch, and M. Anand. A well-timed shift from local to global agreements accelerates climate change mitigation. Nature Communications 12, 2908.
  Abstract Citation Links
• Article
  A. Presbitero, V. R. Melnikov, V. V. Krzhizhanovskaya, and P. M. A. Sloot. A unifying model to estimate the effect of heat stress in the human innate immunity during physical activities. Scientific Reports 11, 16688.
  Abstract Citation Links
• Proceedings
  Khalid Azougagh, Jesse van den Berge, and R. G. Belleman. A prototype for the treatment of children with selective mutism using interactive 360° VR. In: EuroXR 2021: Proceedings of the Virtual EuroXR Conference. ISBN 978-951-38-8756-8. pp. 37-43.
  Abstract Citation Links
• Article
  T. I. Józsa, R. M. Padmos, N. Samuels, W. K. El-Bouri, A. G. Hoekstra, and S. J. Payne. A porous circulation model of the human brain for in silico clinical trials in ischaemic stroke. Interface Focus 11(1), 20190127.
  Abstract Citation Links
• Proceedings
  B. Su, J. Kwak, A. R. Pourghaderi, M. H. Lees, K. B. K. Tan, S. Y. Loo, I. S. Y. Chua, J. L. J. Quah, W. Cai, and M. E. H. Ong. A Model-based Analysis of Evacuation Strategies in Hospital Emergency Departments. In: 2021 Winter Simulation Conference (WSC 2021). ISBN 9781665433112. pp. 1583-1594.
  Abstract Citation Links
• Article
  S. V. Kovalchuk, V. V. Krzhizhanovskaya, M. Paszyński, G. Závodszky, M. H. Lees, J. Dongarra, and P. M. A. Sloot. 20 years of computational science: Selected papers from 2020 International Conference on Computational Science. Journal of Computational Science 53, 101395.
  Citation Links

2020

• Article
  D. Roy and M. Lees. Understanding resilience in slums using an agent-based model. Computers, Environment and Urban Systems 80, 101458.
  Abstract Citation Links
• Article
  J. Uleman, R. J. F. Melis, A. Hoekstra, R. Quax, and M. G. M. Olde Rikkert. Uncovering the multicausality of Alzheimer’s disease: A systems modeling approach. Alzheimer's & Dementia 16(S10), e041105.
  Abstract Citation Links
• PhD Thesis
  A. Nikishova. Uncertainty quantification of multiscale models. ISBN 9789402819182. Supervised by A. G. Hoekstra and P. V. Coveney.
  Abstract Citation Links
• Article
  A. Taberna, T. Filatova, D. Roy, and B. Noll. Tracing resilience, social dynamics and behavioral change: a review of agent-based flood risk models. Socio-Environmental Systems Modelling 2, 17938.
  Abstract Citation Links
• Article
  B. Czaja, M. Gutierrez, G. Závodszky, D. de Kanter, A. Hoekstra, and O. Eniola-Adefeso. The influence of red blood cell deformability on hematocrit profiles and platelet margination. PLoS Computational Biology 16(3), e1007716.
  Abstract Citation Links
• Article
  V. R. Melnikov, V. V. Krzhizhanovskaya, M. H. Lees, and P. M. A. Sloot. The impact of pace of life on pedestrian heat stress: A computational modelling approach. Environmental Research 186, 109397.
  Abstract Citation Links
• Article
  L. Crielaard, P. Dutta, R. Quax, M. Nicolaou, N. Merabet, K. Stronks, and P. M. A. Sloot. Social norms and obesity prevalence: From cohort to system dynamics models. Obesity Reviews 21(9), e13044.
  Abstract Citation Links
• Article
  A. Nikishova, G. E. Comi, and A. G. Hoekstra. Sensitivity analysis based dimension reduction of multiscale models. Mathematics and Computers in Simulation 170, pp. 205-220.
  Abstract Citation Links
• Proceedings
  I. Derevitskii, N. Kogtikov, M. H. Lees, W. Cai, and M. E. H. Ong. Risk-based AED placement - Singapore case. In: Computational Science – ICCS 2020. ISBN 9783030504236. IV, pp. 577-590.
  Abstract Citation Links
• PhD Thesis
  I. Anagnostou. Risk management in trading activities through the lens of complex systems theory. ISBN 9789464211009. Supervised by B. D. Kandhai and A. G. Hoekstra.
  Abstract Citation Links
• Article
  M. Girard and T. Bereau. Regulating Lipid Composition Rationalizes Acyl Tail Saturation Homeostasis in Ectotherms. Biophysical Journal 119(5), pp. 892-899.
  Abstract Citation Links

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