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Proceedings
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Proceedings
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Proceedings
S. Koek, E. Takács, and A. W. Abcouwer.
Personal Commitment and performance improvement : a new evaluation.
In: Proceedings of the 2021 SIGED International Conference on Information Systems Education and Research.
ISBN 9781734312324.
pp. 237-248.
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Proceedings
M. Meijering, T. Abcouwer, and E. Takács.
Overcoming the Traps in the Adaptive Cycle of Resilience Model.
In: Eurasian Business and Economics Perspectives.
ISBN 9783030853044.
pp. 59-83.
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Article
T. I. Józsa, R. M. Padmos, W. K. El-Bouri, A. G. Hoekstra, and S. J. Payne.
On the Sensitivity Analysis of Porous Finite Element Models for Cerebral Perfusion Estimation.
Annals of Biomedical Engineering
49(12), p. 3647–3665.
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Article
D. Ye, A. Nikishova, L. Veen, P. Zun, and A. G. Hoekstra.
Non-intrusive and semi-intrusive uncertainty quantification of a multiscale in-stent restenosis model.
Reliability Engineering & System Safety
214, 107734.
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Article
G. Buiten, C. Diks, A. Faber, E. Heemskerk, C. Mattsson, F. Takes, and P. Sloot.
Netwerkanalyse biedt nieuwe inzichten voor clustergericht energiebeleid.
Economisch-Statistische Berichten
106(4804), pp. 586-588.
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Article
P. Mondal, P.-A. Cazade, A. K. Das, T. Bereau, and M. Meuwly.
Multipolar Force Fields for Amide-I Spectroscopy from Conformational Dynamics of the Alanine Trimer.
The journal of Physical Chemistry. B
125(39), pp. 10928-10938.
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Article
R. M. Padmos, N. Arrarte Terreros, T. I. Józsa, G. Závodszky, H. A. Marquering, C. B. L. M. Majoie, and A. G. Hoekstra.
Modelling the leptomeningeal collateral circulation during acute ischaemic stroke.
Medical Engineering & Physics
91, pp. 1-11.
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PhD Thesis
M. Bause.
Maximum caliber approach to reweight dynamics of non-equilibrium steady states.
Supervised by
T. Bereau and E. J. Meijer.
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Article
J. F. Uleman, R. J. F. Melis, R. Quax, E. A. van der Zee, D. Thijssen, M. Dresler, O. van de Rest, I. F. van der Velpen, H. H. H. Adams, B. Schmand, I. M. C. M. de Kok, J. de Bresser, E. Richard, M. Verbeek, A. G. Hoekstra, E. A. J. A. Rouwette, and M. G. M. Olde Rikkert.
Mapping the multicausality of Alzheimer’s disease through group model building.
GeroScience
43(2), p. 829–843.
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Proceedings
Emoke Takács, A. W. Abcouwer, and Robin de Boer.
Management and Leadership Skills and Attitude in Uncertainty.
In: Proceedings of the 17th European Conference on Management, Leadership and Governance.
ISBN 9781914587214.
pp. 401-410.
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Article
P. Rutten, M. H. Lees, S. Klous, and P. M. A. Sloot.
Intermittent and persistent movement patterns of dance event visitors in large sporting venues.
Physica A : Statistical Mechanics and its Applications
563, 125448.
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Article
Martin Girard and Tristan Bereau.
Insights into Regulation of Cell Membranes through Regulated Ensembles.
Biophysical Journal
120(3, Supplement 1), p. 5A.
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Article
Tristan Bereau.
Inserting Small Molecules Across Membrane Mixtures: Insight from the Potential of Mean Force.
Biophysical Journal
120(3, Supplement 1), p. 10A.
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Proceedings
A. W. Abcouwer, Emoke Takács, and Csilla Rácz.
Innovating Management and Leadership in Contemporary Times: Motivation and Evaluation in Learning.
In: Proceedings of the 17th European Conference on Management, Leadership and Governance.
ISBN 9781914587214.
pp. 1-11.
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Article
P. Dutta, R. Quax, L. Crielaard, L. Badiali, and P. M. A. Sloot.
Inferring temporal dynamics from cross-sectional data using Langevin dynamics.
Royal Society Open Science
8(11), 211374.
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Article
C. Miller, R. M. Padmos, M. van der Kolk, T. I. Józsa, N. Samuels, Y. Xue, S. J. Payne, and A. G. Hoekstra.
In silico trials for treatment of acute ischemic stroke: Design and implementation.
Computers in Biology and Medicine
137, 104802.
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Article
I. C. A. Scherpbier, M. E. Abrahamse, R. G. Belleman, A. Popma, and R. J. L. Lindauer.
Implementation of Virtual Reality to Parent-Child Interaction Therapy for Enhancement of Positive Parenting Skills: The Study Protocol for Single-Case Experimental Design with Multiple Baselines.
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Proceedings
Youssef Assal, Emoke Takacs, and A. W. Abcouwer.
INFORMATION OR COMPLICATION?.
In: 37th EBES Conference Proceedings.
37-II, pp. 1249-1261.
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Article
J. W. S. McCullough and P. V. Coveney.
High fidelity blood flow in a patient-specific arteriovenous fistula.
Scientific Reports
11, 22301.
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Article
B. J. M. van Rooij, G. Závodszky, A. G. Hoekstra, and D. N. Ku.
Haemodynamic flow conditions at the initiation of high-shear platelet aggregation: a combined in vitro and cellular in silico study.
Interface Focus
11(1), 20190126.
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Article
C. E. S. Mattsson, F. W. Takes, E. M. Heemskerk, C. Diks, G. Buiten, A. Faber, and P. M. A. Sloot.
Functional Structure in Production Networks.
Frontiers in Big Data
4, 666712.
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Article
M. Girard and T. Bereau.
Finite-size transitions in complex membranes.
Biophysical Journal
120(12), pp. 2436-2443.
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Article
T. Abcouwer, E. Takács, and J. Solymosy.
Fine-tuning the Evaluation Focus in the University Cooperative Learning Model in Relation to the Pandemic.
Communications of the Association for Information Systems
48, 25.
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Article
E. Weinans, R. Quax, E. H. van Nes, and I. A. van de Leemput.
Evaluating the performance of multivariate indicators of resilience loss.
Scientific Reports
11, 9148.
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Article
J. Kwak, M. H. Lees, W. Cai, A. R. Pourghaderi, and M. E. H. Ong.
Estimating horizontal movement performance of patient beds and the impact on emergency evacuation time.
Safety Science
134, 105038.
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Article
V. Karbovskii, M. Lees, A. Presbitero, A. Kurilkin, D. Voloshin, I. Derevitskii, A. Karsakov, and P. M. A. Sloot.
Ensemble learning for large-scale crowd flow prediction.
Engineering Applications of Artificial Intelligence
106, 104469.
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Article
P. Zun, A. Svitenkov, and A. Hoekstra.
Effects of local coronary blood flow dynamics on the predictions of a model of in-stent restenosis.
Journal of Biomechanics
120, 110361.
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Proceedings
T. Schilstra, E. Takács, and T. Abcouwer.
Ecosystem Approach to life-long learning.
In: Proceedings of the 2021 SIGED International Conference on Information Systems Education and Research.
ISBN 9781734312324.
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Article
J. F. Rudzinski, S. Kloth, S. Wörner, T. Pal, K. Kremer, T. Bereau, and M. Vogel.
Dynamical properties across different coarse-grained models for ionic liquids.
Journal of Physics-Condensed Matter
33(22), 224001.
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Proceedings
D. Knol, F. de Leeuw, J. F. Meirink, and V. V. Krzhizhanovskaya.
Deep Learning for Solar Irradiance Nowcasting: A Comparison of a Recurrent Neural Network and Two Traditional Methods.
In:
Computational Science – ICCS 2021.
ISBN
9783030779771.
V, pp. 309-322.
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Article
A. Dutta, J. Vreeken, L. M. Ghiringhelli, and T. Bereau.
Data-driven equation for drug-membrane permeability across drugs and membranes.
Journal of Chemical Physics
154(24), 244114.
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Article
R. M. Padmos, T. I. Józsa, W. K. El-Bouri, P. R. Konduri, S. J. Payne, and A. G. Hoekstra.
Coupling one-dimensional arterial blood flow to three-dimensional tissue perfusion models for in silico trials of acute ischaemic stroke.
Interface Focus
11(1), 20190125.
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Article
S. C. Lodestijn, T. van den Bosch, L. E. Nijman, L. F. Moreno, S. Schlingemann, V. M. Sheraton, S. M. van Neerven, J. J. Koning, F. A. Vieira Braga, N. J. Paauw, M. C. Lecca, K. J. Lenos, E. Morissey, D. M. Miedema, D. J. Winton, M. F. Bijlsma, and L. Vermeulen.
Continuous clonal labeling reveals uniform progenitor potential in the adult exocrine pancreas.
Cell Stem Cell
28(11), pp. 2009-2019.e4.
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Article
M. Girard and T. Bereau.
Computer simulations of lipid regulation by molecular semigrand canonical ensembles.
Biophysical Journal
120(12), pp. 2370-2373.
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PhD Thesis
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Article
T. Bereau.
Computational compound screening of biomolecules and soft materials by molecular simulations.
Modelling and Simulation in Materials Science and Engineering
29(2), 023001.
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Article
P. V. Coveney, A. Hoekstra, B. Rodriguez, and M. Viceconti.
Computational biomedicine. Part II.
Interface Focus
11(1), 20200082.
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Article
W. Sun, L. Liu, X. Chen, A. Szolnoki, and V. V. Vasconcelos.
Combination of institutional incentives for cooperative governance of risky commons.
iScience
24(8), 102844.
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Article
V. Vasconcelos and F. Santos.
Biased perceptions explain collective action deadlocks and suggest new mechanisms to prompt cooperation. Authors Vítor Vasconcelos and Fernando Santos on the article.
IAS Review
2, 2.2.
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Article
F. P. Santos, S. A. Levin, and V. V. Vasconcelos.
Biased perceptions explain collective action deadlocks and suggest new mechanisms to prompt cooperation.
iScience
24(4), 102375.
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Article
Yasemin Bozkurt Varolgunes, Tristan Bereau, and Joseph F. Rudzinski.
Automated Identification of Collective Variables and Metastable States from Molecular Dynamics Data.
Biophysical Journal
120(3, Supplement 1), p. 79A.
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Article
G. Luraghi, S. Bridio, C. Miller, A. Hoekstra, J. F. Rodriguez Matas, and F. Migliavacca.
Applicability analysis to evaluate credibility of an in silico thrombectomy procedure.
Journal of Biomechanics
126, 110631.
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Article
J. F. Uleman, R. Quax, R. J. F. Melis, A. Hoekstra, and M. G. M. Olde Rikkert.
An individualized systems model to optimize Alzheimer’s disease prevention strategies.
Alzheimer's & Dementia
17(S10), e050885.
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Article
J. W. S. McCullough and P. V. Coveney.
An efficient, localised approach for the simulation of elastic blood vessels using the lattice Boltzmann method.
Scientific Reports
11(1), 24260.
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Article
S. Ghaffarian, D. Roy, T. Filatova, and N. Kerle.
Agent-based modelling of post-disaster recovery with remote sensing data.
International Journal of Disaster Risk Reduction
.
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Article
M. Stieffenhofer, T. Bereau, and M. Wand.
Adversarial reverse mapping of condensed-phase molecular structures: Chemical transferability.
APL Materials
9(3), 031107.
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Article
J. van der Wal, C. D. van Borkulo, M. K. Deserno, J. J. F. Breedvelt, M. Lees, J. C. Lokman, D. Borsboom, D. Denys, R. J. van Holst, M. P. Smidt, K. Stronks, P. J. Lucassen, J. C. M. van Weert, P. M. A. Sloot, C. L. Bockting, and R. W. Wiers.
Advancing urban mental health research: from complexity science to actionable targets for intervention.
The Lancet. Psychiatry
8(11), pp. 991-1000.
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Article
V. A. Karatayev, V. V. Vasconcelos, A.-S. Lafuite, S. A. Levin, C. T. Bauch, and M. Anand.
A well-timed shift from local to global agreements accelerates climate change mitigation.
Nature Communications
12, 2908.
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Article
A. Presbitero, V. R. Melnikov, V. V. Krzhizhanovskaya, and P. M. A. Sloot.
A unifying model to estimate the effect of heat stress in the human innate immunity during physical activities.
Scientific Reports
11, 16688.
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Proceedings
Khalid Azougagh, Jesse van den Berge, and R. G. Belleman.
A prototype for the treatment of children with selective mutism using interactive 360° VR.
In:
EuroXR 2021: Proceedings of the Virtual EuroXR Conference.
ISBN
978-951-38-8756-8.
pp. 37-43.
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Article
T. I. Józsa, R. M. Padmos, N. Samuels, W. K. El-Bouri, A. G. Hoekstra, and S. J. Payne.
A porous circulation model of the human brain for in silico clinical trials in ischaemic stroke.
Interface Focus
11(1), 20190127.
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Proceedings
B. Su, J. Kwak, A. R. Pourghaderi, M. H. Lees, K. B. K. Tan, S. Y. Loo, I. S. Y. Chua, J. L. J. Quah, W. Cai, and M. E. H. Ong.
A Model-based Analysis of Evacuation Strategies in Hospital Emergency Departments.
In:
2021 Winter Simulation Conference (WSC 2021).
ISBN
9781665433112.
pp. 1583-1594.
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Article
Publications of the CSL group